Salmonella enterica subsp. enterica serovar Typhi LXYSH |
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Putative Salmonella enterica subsp. enterica serovar Typhi LXYSH RM systems
Ref: Zhan,Z. unpublished
REBASE ref # 28284
Complete sequence: 4,780,894 bp
GenBank #: CP030936
REBASE acronym: SenLXYSH
Org_num: 33585
All begin DS748_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15665 | endoribonuclease SymE | |||
| 15670 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SenLXYSHORF15670P |
| ??? | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.SenLXYSHORF15670P |
| 15680 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenLXYSHORF15670P |
| 15685 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1460 | DUF550 domain-containing protein | |||
| 1465 | M | M.StyTORF1914P (100% identity) | M.SenLXYSHORF1465P | |
| 1470 | ead/Ea22-like family protein | |||
| 1525 | DGQHR domain-containing protein | |||
| 1530 | M | M.StyTORF1926P (100% identity) | M.SenLXYSHORF1530P | |
| 1535 | DUF4060 family protein | |||
| 8840 | Fis family transcriptional regulator | |||
| 8845 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLXYSHORF8845P |
| 8850 | DUF2556 domain-containing protein | |||
| 9350 | ribulose-phosphate 3-epimerase | |||
| 9355 | M | M.StyTDamP (100% identity) | GATC | M.SenLXYSHDamP |
| 9360 | cell division protein DamX | |||
| 12625 | replication endonuclease | |||
| 12630 | M | M.StyTORF3409P (100% identity) | GATC | M.SenLXYSHORF12630P |
| 12635 | TraR/DksA family transcriptional regulator | |||
| 14360 | replication endonuclease | |||
| 14365 | M | M.StyTORF4329P (100% identity) | M.SenLXYSHORF14365P | |
| 14370 | 3-5 exonuclease | |||
| 20680 | phosphohydrolase | |||
| 20685 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenLXYSHDcmP |
| 20690 | V | V.StyTDcmP (100% identity) | V.SenLXYSHDcmP | |
| 20695 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4625 | hypothetical protein | |||
| 4630 | R | StyTORF2507P (99% identity) | CAGAG | SenLXYSHORF4635P |
| 4635 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenLXYSHORF4635P |
| 4640 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15680 | type I restriction-modification system | |||
| 15685 | R | SenTS6MrrP (100% identity) | SenLXYSHMrrP | |
| 15690 | BrnT family toxin | |||