Photobacterium damselae subsp. damselae KC-Na-NB1 |
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Putative Photobacterium damselae subsp. damselae KC-Na-NB1 RM systems
Ref: Kim,J.H. unpublished
REBASE ref # 24966
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,125,062 bp | CP035457 |
| chromosome 2: | 1,098,614 bp | CP035458 |
REBASE acronym: PdaNB1
Org_num: 33580
All begin ETN89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 12635 | M48 family peptidase | |||
| 12640 | R | PdaNa1IIP (100% identity) | PdaNB1ORF12615P | |
| 12645 | 167 aa hypothetical protein | |||
| 12650 | 180 aa hypothetical protein | |||
| 12655 | 228 aa hypothetical protein | |||
| 12660 | TIGR02646 family protein | |||
| 12665 | ATP-binding protein | |||
| 12670 | S | S.Vow605ORFEP (95% identity) | S.PdaNB1ORF12615P | |
| 12675 | M | M.PdaNa1II (100% identity) | M.PdaNB1ORF12615P | |
| 12680 | restriction endonuclease subunit S | |||
| 12705 | 280 aa hypothetical protein | |||
| 12710 | M | SAM-dependent DNA methyltransferase | M.PdaNB1ORF12710AP | |
| 12715 | IS21 family transposase | |||
| 12720 | AAA family ATPase | |||
| 12725 | M | M1.PdaNa1ORF7050P (100% identity) | M.PdaNB1ORF12710BP | |
| 12730 | S | S.PdaNa1ORF7050P (100% identity) | S.PdaNB1ORF12710P | |
| 12735 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 6705 | 503 aa hypothetical protein | |||
| 6710 | M | M.PdaNa1I (100% identity) | GATC | M.PdaNB1DamP |
| 6715 | DUF2970 domain-containing protein | |||
| chromosome 2 | ||||
| 17990 | HD domain-containing protein | |||
| 17995 | M | M.PdaNa1ORF16550P (100% identity) | M.PdaNB1ORF17995P | |
| 18000 | transposase | |||