Escherichia coli O157:H7 C1-057 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 C1-057 RM systems
Ref: Jia,M. and Yang,H. unpublished
REBASE ref # 28270
| Sequence length: | GenBank #: | |
| Chromosome: | 5,452,210 bp | CP035366 |
| plasmid pC1-057: | 97,494 bp | CP035367 |
REBASE acronym: Eco1057
Org_num: 33475
All begin ES669_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27485 | endoribonuclease SymE | |||
| 27490 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1057ORF27495P |
| 27495 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco1057ORF27495P |
| 27500 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1057ORF27495P |
| 27505 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1435 | PerC family transcriptional regulator | |||
| 1440 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco1057ORF1440P |
| 1445 | LexA family transcriptional regulator | |||
| 8840 | TrmB family transcriptional regulator | |||
| 8845 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1057ORF8845P | |
| 8860 | 61 aa hypothetical protein | |||
| 9235 | TrmB family transcriptional regulator | |||
| 9240 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco1057ORF9240P | |
| 9245 | DUF1737 domain-containing protein | |||
| 13565 | drug/metabolite exporter YedA | |||
| 13570 | V | V.EcosPA8DcmP (100% identity) | V.Eco1057DcmP | |
| 13575 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1057DcmP |
| 13580 | phosphohydrolase | |||
| 21350 | DNA-binding transcriptional regulator Fis | |||
| 21355 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1057ORF21355P |
| 21360 | DUF2556 domain-containing protein | |||
| 21880 | ribulose-phosphate 3-epimerase | |||
| 21885 | M | adenine-specific DNA-methyltransferase | GATC | M.Eco1057DamP |
| 21890 | cell division protein DamX | |||
| 25890 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1057ORF25900P | |
| 25905 | Eae protein | |||
| 27120 | DUF4102 domain-containing protein | |||
| 27125 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco1057ORF27135P |
| ??? | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco1057ORF27135P |
| 27135 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco1057ORF27135P |
| 27140 | 87 aa hypothetical protein | |||
| 27255 | DEAD/DEAH box helicase | |||
| 27260 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1057ORF27260P |
| plasmid pC1-057 | ||||
| 27985 | 101 aa hypothetical protein | |||
| 27990 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1057ORF27990P | |
| 27995 | 73 aa hypothetical protein | |||