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Putative Citrobacter freundii R17 RM systems
Ref: Jiang,X. and Zheng,B. unpublished
REBASE ref # 28169
Sequence length: | GenBank #: | |
Chromosome: | 5,124,258 bp | CP035276 |
plasmid pCFR17_1: | 206,820 bp | CP035277 |
REBASE acronym: CfrR17
Org_num: 33351
All begin EQ249_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3520 | inovirus Gp2 family protein | |||
3525 | M | M.Sen80013ORF6310P (100% identity) | M.CfrR17ORF3525P | |
3530 | anticodon nuclease | |||
3535 | S | S.Sen80013ORF6310P (100% identity) | S.CfrR17ORF3525P | |
3540 | 61 aa hypothetical protein | |||
3545 | R | Sen80013ORF6310P (100% identity) | CfrR17ORF3525P | |
3550 | 56 aa hypothetical protein | |||
21665 | restriction endonuclease | |||
21670 | M | M.CyoCF10ORF20830P (98% identity) | M.CfrR17ORF21670P | |
21675 | S | S.CweMH18II (59% identity) | S.CfrR17ORF21670P | |
21680 | R | Sen5056ORF19475P (98% identity) | CfrR17ORF21670P | |
21685 | endoribonuclease SymE | |||
21930 | toll/interleukin-1 receptor domain-containing | |||
21935 | R | Kox1686ORF9540P (99% identity) | CfrR17ORF21940P | |
21940 | M | M.Ero982ORF2475P (98% identity) | M.CfrR17ORF21940P | |
21945 | S | S.Psp119ORFCP (54% identity) | S.CfrR17ORF21940P | |
21950 | 384 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1835 | cell division protein DamX | |||
1840 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrR17DamP |
1845 | ribulose-phosphate 3-epimerase | |||
2385 | DUF2556 domain-containing protein | |||
2390 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.CfrR17ORF2390P |
2395 | DNA-binding transcriptional regulator Fis | |||
7810 | 72 aa hypothetical protein | |||
7815 | M | M.Cfr12C20ORF14630P (96% identity) | M.CfrR17ORF7815P | |
7820 | 94 aa hypothetical protein | |||
8910 | 326 aa hypothetical protein | |||
8915 | M | M2.Cfr7749CORF20P (98% identity) | M.CfrR17ORF8915P | |
8920 | RusA family crossover junction | |||
10430 | phosphohydrolase | |||
10435 | M | M.CfrZY198ORF9290P (100% identity) | CCWGG | M.CfrR17ORF10435P |
10440 | V | V.CspS39ORF13780P (100% identity) | V.CfrR17ORF10435P | |
10445 | drug/metabolite exporter YedA | |||
11885 | integrase | |||
11890 | R | CspMGH103ORFIP (82% identity) | CfrR17ORF11895P | |
11895 | M | M.EroWS222ORF18775P (98% identity) | M.CfrR17ORF11895P | |
11900 | 472 aa hypothetical protein | |||
plasmid pCFR17_1 | ||||
26230 | 73 aa hypothetical protein | |||
26235 | M | M.Kpni11ayORF5166P (100% identity) | M.CfrR17ORF26235P | |
26240 | DNA breaking-rejoining protein | |||
26260 | integrase | |||
26265 | R | SmaBWH35ORF16650P (100% identity) | CCWGG | CfrR17ORF26270P |
26270 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M.CfrR17ORF26270P |
26275 | AAA family ATPase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
16065 | site-specific integrase | |||
16070 | M | M.Rpl430II (99% identity) | M.CfrR17ORF16070P | |
16075 | R | Eas576ORF16290P (99% identity) | CfrR17ORF16070P | |
16080 | shufflon system plasmid conjugative transfer | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21655 | 130 aa hypothetical protein | |||
21660 | R | CyoCF10McrBP (100% identity) | CfrR17McrBP | |
21665 | R | CyoCF10McrCP (99% identity) | CfrR17McrCP | |
21670 | DNA methyltransferase |