Escherichia coli WCHEC020032 |
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Putative Escherichia coli WCHEC020032 RM systems
Ref: Liu,L. et al. unpublished
REBASE ref # 26344
| Sequence length: | GenBank #: | |
| Chromosome: | 4,686,461 bp | CP034966 |
| plasmid p1_020032: | 90,842 bp | CP034959 |
| plasmid pCTXM3_020032: | 87,704 bp | CP034964 |
REBASE acronym: Eco20032
Org_num: 33299
All begin C7V17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7530 | IS1 family transposase | |||
| 7535 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco20032ORF7545P |
| 7540 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco20032ORF7545P |
| 7545 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco20032ORF7545P |
| 7550 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3640 | cell division protein DamX | |||
| 3645 | M | adenine-specific DNA-methyltransferase | GATC | M.Eco20032DamP |
| 3650 | ribulose-phosphate 3-epimerase | |||
| 4270 | DUF2556 domain-containing protein | |||
| 4275 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco20032ORF4275P |
| 4280 | site-specific integrase | |||
| 10735 | phosphohydrolase | |||
| 10740 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco20032DcmP |
| 10745 | V | V.EcosEC7DcmP (100% identity) | V.Eco20032DcmP | |
| 10750 | drug/metabolite exporter YedA | |||
| 19565 | phage lysis protein EssD | |||
| 19570 | M | M.Ecoi012ORF10825P (100% identity) | M.Eco20032ORF19570P | |
| 19575 | TrmB family transcriptional regulator | |||
| 19585 | 229 aa hypothetical protein | |||
| 19590 | M | M.EcoST131ORF16015P (100% identity) | M.Eco20032ORF19590P | |
| 19595 | antitermination protein | |||
| plasmid p1_020032 | ||||
| 475 | 63 aa hypothetical protein | |||
| 490 | M | M.EcoUKDORF25705P (100% identity) | M.Eco20032ORF490P | |
| 495 | recombination-associated protein RdgC | |||
| plasmid pCTXM3_020032 | ||||
| 1135 | 59 aa hypothetical protein | |||
| 1140 | M | M.Xca80ORFEP (100% identity) | M.Eco20032ORF1140P | |
| 1145 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14940 | isocitrate dehydrogenase | |||
| 14945 | R | EcosEC27McrCP (100% identity) | Eco20032McrCP | |
| 14950 | R | EcoteDMcrBP (100% identity) | Eco20032McrBP | |
| 14955 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16530 | replication endonuclease | |||
| 16535 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco20032ORF16535P |
| 16540 | TraR/DksA family transcriptional regulator | |||