Paracoccus denitrificans ATCC 19367 |
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Putative Paracoccus denitrificans ATCC 19367 RM systems
Ref: Si,Y.Y. et al. unpublished
REBASE ref # 28151
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,858,426 bp | CP035090 |
| chromosome 2: | 1,730,087 bp | CP035091 |
REBASE acronym: Pde19367
Org_num: 33292
All begin EO213_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 395 | helicase | |||
| 400 | RM | PdeDYTN1ORF8440P (100% identity) | Pde19367ORF400P | |
| 405 | DUF2326 domain-containing protein | |||
| 3955 | IS5-like element IS1248A family transposase | |||
| 3960 | R | PdeDYTN1ORF11245P (100% identity) | Pde19367ORF3965P | |
| 3965 | M | M.KvuY25ORF698P (95% identity) | M.Pde19367ORF3965P | |
| 3970 | V | V.PdeDYTN1ORF11245P (100% identity) | V.Pde19367ORF3965P | |
| 3975 | 74 aa hypothetical protein | |||
| 4000 | 74 aa hypothetical protein | |||
| 4005 | M | M2.PdeDYTN1ORF11245P (100% identity) | M.Pde19367ORF4005P | |
| 4010 | HNH endonuclease | |||
| 4165 | GSCFA family protein | |||
| ??? | M | M.PdeR1ORF2250P (100% identity) | M.Pde19367ORF4170P | |
| 4175 | ribonuclease HII | |||
| 8500 | 138 aa hypothetical protein | |||
| 8505 | M | M.Pde3ORF10130P (100% identity) | M.Pde19367ORF8505P | |
| 8510 | 96 aa hypothetical protein | |||
| 8575 | IS110 family transposase | |||
| ??? | M | M.PdeDYTN1ORF1390P (100% identity) | M.Pde19367ORF8575P | |
| 8585 | S26 family signal peptidase | |||
| 9195 | 91 aa hypothetical protein | |||
| 9200 | M | M1.PdeDYTN1ORF2030P (100% identity) | M.Pde19367ORF9200P | |
| 9205 | 206 aa hypothetical protein | |||
| 9205 | 206 aa hypothetical protein | |||
| ??? | M | M2.PdeDYTN1ORF2030P (100% identity) | M.Pde19367ORF9210P | |
| 9220 | type II toxin-antitoxin system HigB family | |||
| 9605 | 139 aa hypothetical protein | |||
| 9610 | M | M.PdeDYTN1ORF2445P (100% identity) | M.Pde19367ORF9610P | |
| 9615 | DNA polymerase III subunit beta | |||
| 12800 | 142 aa hypothetical protein | |||
| 12805 | M | M.PdeDYTN1ORF5670P (100% identity) | M.Pde19367ORF12805P | |
| 12810 | DNA polymerase III subunit beta | |||
| chromosome 2 | ||||
| 16105 | 138 aa hypothetical protein | |||
| 16110 | M | M.Pde3ORF22060P (100% identity) | M.Pde19367ORF16110P | |
| 16115 | 100 aa hypothetical protein | |||
| 16190 | DUF2840 domain-containing protein | |||
| 16195 | M | M.PdeDYTN1ORF16260P (100% identity) | M.Pde19367ORF16195P | |
| 16200 | S26 family signal peptidase | |||
| 17045 | 138 aa hypothetical protein | |||
| 17050 | M | M.PdeDYTN1ORF17125P (100% identity) | M.Pde19367ORF17050P | |
| 17055 | 96 aa hypothetical protein | |||
| 17120 | DUF2840 domain-containing protein | |||
| 17125 | M | M.PdeDYTN1ORF17200P (100% identity) | M.Pde19367ORF17125P | |
| 17130 | S26 family signal peptidase | |||
| 19535 | zinc ribbon domain-containing protein | |||
| 19540 | C | C.PdeDYTN1ORF19635P (100% identity) | C.Pde19367ORF19545P | |
| ??? | M | M.Pde1222ORF3838P (100% identity) | M.Pde19367ORF19545P | |
| 19550 | R | PdeDYTN1ORF19635P (100% identity) | Pde19367ORF19545P | |
| 19555 | 443 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 16900 | 196 aa hypothetical protein | |||
| 16905 | R | 272 aa hypothetical protein | Pde19367ORF16905P | |
| 16910 | 763 aa hypothetical protein | |||