Pseudomonadaceae bacterium SI-3 |
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Putative Pseudomonadaceae bacterium SI-3 RM systems
Ref: Fu,H. and Jiang,P. unpublished
REBASE ref # 28129
Complete sequence: 4,838,607 bp
GenBank #: CP026511
REBASE acronym: PbaSI3
Org_num: 33262
All begin C1896_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 25 | M | M.Pst273II (99% identity) | M.PbaSI3ORF25P | |
| 30 | S | S.Pst273II (60% identity) | S.PbaSI3ORF25P | |
| 35 | R | Pst273IIP (99% identity) | PbaSI3ORF25P | |
| 40 | 95 aa hypothetical protein | |||
| 7700 | peptidase M15 | |||
| 7705 | R | PstJ15ORF7285P (96% identity) | PbaSI3ORF7715P | |
| 7710 | HNH endonuclease | |||
| 7715 | M | M.SstB010ORF7615P (99% identity) | M.PbaSI3ORF7715P | |
| 7720 | 322 aa hypothetical protein | |||
| 7725 | S | S.PspR2A2I (69% identity) | S.PbaSI3ORF7715P | |
| 7730 | nuclease | |||
| 21695 | alpha/beta hydrolase | |||
| 21700 | M | M.PspMT1ORF442P (99% identity) | M.PbaSI3ORF21700P | |
| 21705 | AAA family ATPase | |||
| ??? | S | S.PknB092ORF20630P (53% identity) | S.PbaSI3ORF21700P | |
| 21715 | R | PspMT1ORF442P (98% identity) | PbaSI3ORF21700P | |
| 21720 | pimeloyl-CoA dehydrogenase small subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4820 | DEAD/DEAH box helicase | |||
| 4825 | S | S.Sku7850SI (100% identity) | S.PbaSI3ORF4830P | |
| 4830 | RM | Sku7850SI (100% identity) | GATCGAG | PbaSI3ORF4830P |
| 4835 | helix-turn-helix domain-containing protein | |||
| 17140 | 386 aa hypothetical protein | |||
| 17145 | M | M.PaePALA29ORF4887P (72% identity) | M.PbaSI3ORF17145P | |
| 17150 | 74 aa hypothetical protein | |||