Pseudomonas aeruginosa GIMC5016:PA1840 |
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Putative Pseudomonas aeruginosa GIMC5016:PA1840 RM systems
Ref: Sheremet,A.B. et al. Biomed Res Int 2018, 5810767 (2018)
REBASE ref # 27974
Complete sequence: 6,750,271 bp
GenBank #: CP034430
REBASE acronym: Pae1840
Org_num: 33176
All begin PA1840_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 100 | Site-specific recombinase, phage integrase | |||
| 101 | M | M.Paes32ORF100P (100% identity) | M.Pae1840ORF101P | |
| 102 | S | S.Paes32ORF100P (100% identity) | S.Pae1840ORF101P | |
| 103 | R | Paes32ORF100P (100% identity) | Pae1840ORF101P | |
| 104 | Uncharacterized protein | |||
| 399 | M48 family peptidase | |||
| 400 | R | Ssp0042ORF670P (100% identity) | TCCANNNNNNCGT | Pae1840ORF407P |
| 401 | VWA domain-containing protein | |||
| 402 | ATPase | |||
| 403 | PD-(D/E)XK nuclease superfamily protein | |||
| 404 | Virulence_RhuM suerfamily protein | |||
| 405 | Uncharacterized protein | |||
| 406 | S | S.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | S.Pae1840ORF407P |
| 407 | M | M.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | M.Pae1840ORF407P |
| 408 | restriction endonuclease subunit S | |||
| 5988 | DUF91 domain-containing protein | |||
| 5989 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae1840ORF5990P |
| 5990 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae1840ORF5990P |
| 5991 | endonuclease | |||
| 5992 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae1840ORF5990P |
| 5993 | Uncharacterized protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4 | DNA gyrase subunit B | |||
| 5 | RM | Paes32ORF5P (100% identity) | GATCGAG | Pae1840ORF5P |
| 6 | Uncharacterized protein | |||
| 2418 | Uncharacterized protein | |||
| 2419 | M | M.PaeP13ORF19105P (100% identity) | M.Pae1840ORF2419P | |
| 2420 | IS3 family transposase | |||
| 5079 | Nucleoid-associated protein NdpA | |||
| 5080 | M | M.Paes32ORF1382P (100% identity) | M.Pae1840ORF5080P | |
| 5081 | Arc family DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2498 | Abortive infection phage resistance protein | |||
| 2499 | M | M.Paes32ORF4058P (100% identity) | M.Pae1840ORF2499P | |
| 2500 | R | Paes32ORF4058P (100% identity) | Pae1840ORF2499P | |
| 2501 | Transposase | |||