Salmonella enterica subsp. enterica serovar Karamoja RSE21 |
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Putative Salmonella enterica subsp. enterica serovar Karamoja RSE21 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 28068
| Sequence length: | GenBank #: | |
| Chromosome: | 4,764,896 bp | CP034709 |
| plasmid pRSE21: | 193,610 bp | CP034710 |
REBASE acronym: SenE21
Org_num: 32990
All begin ELZ88_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | M.StyTDamP (100% identity) | GATC | M.SenE21DamP |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2335 | DUF2556 domain-containing protein | |||
| 2340 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenE21ORF2340P |
| 2345 | DNA-binding transcriptional regulator Fis | |||
| 5720 | TraR/DksA family transcriptional regulator | |||
| 5725 | M | M.SenE40ORF5735P (100% identity) | M.SenE21ORF5725P | |
| 5730 | replication endonuclease | |||
| 9320 | phosphohydrolase | |||
| 9325 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenE21DcmP |
| 9330 | V | V.StyUK1DcmP (100% identity) | V.SenE21DcmP | |
| 9335 | drug/metabolite exporter YedA | |||
| 14300 | 112 aa hypothetical protein | |||
| 14305 | M | M.SenE40ORF14310P (100% identity) | M.SenE21ORF14305P | |
| 14310 | class I SAM-dependent methyltransferase | |||
| 14305 | DNA cytosine methyltransferase | |||
| 14310 | M | M.SenE40ORF14315P (100% identity) | M.SenE21ORF14310P | |
| 14315 | adenine methylase | |||
| 14310 | class I SAM-dependent methyltransferase | |||
| 14315 | M | M.SenE40ORF14320P (100% identity) | M.SenE21ORF14315P | |
| 14320 | 82 aa hypothetical protein | |||
| 20470 | 61 aa hypothetical protein | |||
| 20475 | R | SenS922ORF19305P (100% identity) | CAGCTG | SenE21ORF20485P |
| 20480 | C | C.SptAI (100% identity) | C.SenE21ORF20485P | |
| 20485 | M | M.SptAI (100% identity) | CAGCTG | M.SenE21ORF20485P |
| 20490 | DUF4102 domain-containing protein | |||
| plasmid pRSE21 | ||||
| 24035 | 73 aa hypothetical protein | |||
| 24040 | M | M.SenE40ORF23805P (100% identity) | M.SenE21ORF24035P | |
| 24045 | 67 aa hypothetical protein | |||
| 24885 | ribbon-helix-helix protein, CopG family | |||
| 23750 | M | DNA (cytosine-5-)-methyltransferase | M.SenE21ORF23750P | |
| 23755 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18090 | 33 aa hypothetical protein | |||
| ??? | R | SenFFLORFCP (100% identity) | CAGAG | SenE21ORF18100P |
| 18100 | M | M.SenS316II (100% identity) | CAGAG | M.SenE21ORF18100P |
| 18105 | MFS transporter | |||