Pectobacterium parmentieri IFB5427 |
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Putative Pectobacterium parmentieri IFB5427 RM systems
Ref: Zoledowska,S. et al. BMC Genomics 19 (1), 751 (2018)
REBASE ref # 28037
| Sequence length: | GenBank #: | |
| Chromosome: | 5,125,304 bp | CP027260 |
| plasmid pPAR01: | 101,998 bp | CP027261 |
REBASE acronym: Ppa5427
Org_num: 32936
All begin C5E18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2350 | DUF4102 domain-containing protein | |||
| 2355 | M | M.Pwa1AORF16135P (100% identity) | M.Ppa5427ORF2355P | |
| 2360 | S | S.Pwa1AORF16135P (100% identity) | S.Ppa5427ORF2355P | |
| 2365 | R | Pwa1AORF16135P (100% identity) | Ppa5427ORF2355P | |
| 2370 | hydroxyacid dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2565 | 446 aa hypothetical protein | |||
| 2570 | R | Pwa1AORF15930P (100% identity) | Ppa5427ORF2570P | |
| 2575 | DUF1615 domain-containing protein | |||
| 3965 | XRE family transcriptional regulator | |||
| 3970 | R | Pwa1AORF14510P (100% identity) | Ppa5427ORF3970P | |
| 3975 | type VI secretion system tube protein Hcp | |||
| 11845 | 100 aa hypothetical protein | |||
| 11850 | M | M.PbrPCC1ORF20005P (97% identity) | M.Ppa5427ORF11850P | |
| 11855 | NinE family protein | |||
| plasmid pPAR01 | ||||
| 24590 | 73 aa hypothetical protein | |||
| 24595 | M | M.PatP1526ORF595P (98% identity) | M.Ppa5427ORF24595P | |
| 24600 | plasmid stability protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10665 | recombination-associated protein RdgC | |||
| 10670 | M | M.Pwa1AORF7980P (100% identity) | M.Ppa5427ORF10670P | |
| 10675 | DUF1367 domain-containing protein | |||
| 21245 | ribulose-phosphate 3-epimerase | |||
| 21250 | M | M.PwaDamP (100% identity) | M.Ppa5427ORF21250P | |
| 21255 | SPOR domain-containing protein | |||