Vibrio species 2017V-1105 |
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Putative Vibrio species 2017V-1105 RM systems
Ref: Islam,M.T. et al. unpublished
REBASE ref # 28020
Contig set: 4,080,506 bp
GenBank #: QKKT00000000 (NZ_QKKT00000000)
REBASE acronym: Vsp1105
Org_num: 32923
All begin DLR71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18390 | integrase | |||
| 18395 | M | M.VchN1ORF17170P (96% identity) | M.Vsp1105ORF18395P | |
| 18400 | S | S1.Vsp43136ORF16085P (81% identity) | S1.Vsp1105ORF18395P | |
| 18405 | S | S.Psh10364I (58% identity) | S2.Vsp1105ORF18395P | |
| 18410 | 157 aa hypothetical protein | |||
| 18415 | exonuclease V subunit alpha | |||
| 18420 | tetratricopeptide repeat protein | |||
| 18425 | HrgA protein | |||
| 18430 | R | VowVC2WORF8535P (99% identity) | Vsp1105ORF18395P | |
| 18435 | 83 aa hypothetical protein | |||
| 3920 | 187 aa hypothetical protein | |||
| 3925 | R | SspLC6ORF17415P (100% identity) | CACNNNNNNTAYG | Vsp1105ORF3940P |
| 3930 | Fic family protein | |||
| 3935 | S | S.Vch14400ORF457P (100% identity) | CACNNNNNNTAYG | S.Vsp1105ORF3940P |
| 3940 | M | M.VchVCC19ORFDP (100% identity) | CACNNNNNNTAYG | M.Vsp1105ORF3940P |
| 3945 | WYL domain-containing protein | |||
| 17400 | M48 family peptidase | |||
| 17405 | R | Vpas10329ORF3030P (99% identity) | Vsp1105ORF17420P | |
| 17410 | S | S.PdaXP11ORF19355P (93% identity) | S.Vsp1105ORF17420P | |
| 17415 | DNA damage-inducible protein D | |||
| 17420 | M | M.Sal18064ORF6435P (98% identity) | M.Vsp1105ORF17420P | |
| 17425 | 76 aa hypothetical protein | |||
| 625 | AAA family ATPase | |||
| 630 | R | Vna2232ORF11225P (98% identity) | Vsp1105ORF650P | |
| 635 | transposase | |||
| 640 | S | S.SmaBL03ORF45300P (54% identity) | S1.Vsp1105ORF650P | |
| 645 | S | S1.Vvu249787ORF3670P (98% identity) | S2.Vsp1105ORF650P | |
| 650 | M | M.Vna2232ORF11225P (99% identity) | M.Vsp1105ORF650P | |
| 655 | 294 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6815 | IS481 family transposase | |||
| 6820 | M | M.Vph601ORFCP (99% identity) | M.Vsp1105ORF6820P | |
| 6825 | 253 aa hypothetical protein | |||
| 6830 | DNA-binding response regulator | |||
| 6835 | R | Vph601ORFCP (96% identity) | Vsp1105ORF6820P | |
| 6840 | 141 aa hypothetical protein | |||
| 2215 | ribulose-phosphate 3-epimerase | |||
| 2220 | M | M.VchVCC19ORFAP (100% identity) | GATC | M.Vsp1105DamP |
| 2225 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 610 | AcrB/AcrD/AcrF family protein | |||
| 620 | R | Asp12817McrCP (92% identity) | Vsp1105McrCP | |
| 625 | R | Asp12817McrBP (93% identity) | Vsp1105McrBP | |
| 630 | DEAD/DEAH box helicase | |||