Escherichia coli B7S3 |
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Putative Escherichia coli B7S3 RM systems
Ref: Xu,A. et al. unpublished
REBASE ref # 27919
Contig set: 5,719,618 bp
GenBank #: PNYG00000000 (NZ_PNYG00000000)
REBASE acronym: EcoB7S3
Org_num: 32772
All begin C1I39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26730 | IS3 family transposase | |||
| 26735 | M | M.EcoNT1N28ORFCP (100% identity) | M.EcoB7S3ORF26735P | |
| 26740 | S | S.EcoB8S56ORF27280P (100% identity) | S.EcoB7S3ORF26735P | |
| 26745 | DUF4268 domain-containing protein | |||
| 26750 | R | EcoB8S56ORF27280P (100% identity) | EcoB7S3ORF26735P | |
| 26755 | ATP-binding protein | |||
| 21965 | methyltransferase | |||
| 21970 | S | S.SflN101ORF19075P (100% identity) | S.EcoB7S3ORF21975P | |
| 21975 | M | M.EcoPSUO78ORF15880P (100% identity) | M.EcoB7S3ORF21975P | |
| 21980 | arsenical resistance protein ArsH | |||
| 14190 | endoribonuclease SymE | |||
| ??? | S | S.EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | S.EcoB7S3ORF14205P |
| 14205 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoB7S3ORF14205P |
| 14210 | R | EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | EcoB7S3ORF14205P |
| 14215 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10375 | 64 aa hypothetical protein | |||
| 10380 | M | M.EcoC0348ORF6900P (100% identity) | M.EcoB7S3ORF10380P | |
| 10385 | DGQHR domain-containing protein | |||
| 29110 | holin | |||
| 29115 | M | M.EcoB8S56ORF28800P (100% identity) | M.EcoB7S3ORF29115P | |
| 29120 | TrmB family transcriptional regulator | |||
| 28140 | plasmid maintenance protein CcdB | |||
| 28145 | M | M.SenH18ORF28321P (100% identity) | M.EcoB7S3ORF28145P | |
| 28150 | HNH endonuclease | |||
| 28145 | DNA methyltransferase | |||
| 28150 | R | EcoB7S19ORF28405P (100% identity) | EcoB7S3ORF28150P | |
| 28155 | type B 50S ribosomal protein L31 | |||
| 22210 | 0 aa hypothetical protein | |||
| 22215 | M | M.Sfl9783ORF5079P (100% identity) | M.EcoB7S3ORF22215P | |
| 22220 | HNH endonuclease | |||
| 23465 | drug/metabolite exporter YedA | |||
| 23470 | V | V.EcosE1DcmP (74% identity) | V.EcoB7S3DcmP | |
| 23475 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoB7S3DcmP |
| 23480 | phosphohydrolase | |||
| 20310 | LexA family transcriptional regulator | |||
| 20315 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoB7S3ORF20315P |
| 20320 | helix-turn-helix domain-containing protein | |||
| 16070 | Fis family transcriptional regulator | |||
| 16075 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoB7S3ORF16075P |
| 16080 | DUF2556 domain-containing protein | |||
| 9380 | cell division protein DamX | |||
| 9385 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoB7S3DamP |
| 9390 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27785 | 292 aa hypothetical protein | |||
| 27790 | R | EcoUM1886ORF4740P (100% identity) | EcoB7S3ORF27795P | |
| 27795 | M | M.SenH18ORF28191P (100% identity) | M.EcoB7S3ORF27795P | |
| 27800 | IS3 family transposase | |||
| 28465 | Rop family plasmid primer RNA-binding protein | |||
| 28470 | M | M.SenS089ORF25085P (100% identity) | M.EcoB7S3ORF28470P | |
| 28475 | R | SenSO21ORF25170P (100% identity) | EcoB7S3ORF28470P | |