Streptococcus suis ISU2812 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus suis ISU2812 RM systems
Ref: Nicholson,T.L. and Bayles,D.O. unpublished
REBASE ref # 20989
Complete sequence: 2,577,759 bp
GenBank #: CP017092
REBASE acronym: Ssu2812
Org_num: 17559
All begin A7J09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2980 | restriction endonuclease subunit S | |||
| 2985 | R | Ssu4ORF3320P (99% identity) | Ssu2812ORF3205P | |
| 2990 | S | S3.SsuTJ575ORFGP (64% identity) | S1.Ssu2812ORF3205P | |
| 2995 | cell filamentation protein Fic | |||
| ??? | S | S3.Ssu4ORF3320P (42% identity) | S2.Ssu2812ORF3205P | |
| 3005 | M | M.Ssu4ORF3320P (100% identity) | M.Ssu2812ORF3205P | |
| 3010 | serine--tRNA ligase | |||
| 9230 | 624 aa hypothetical protein | |||
| 9235 | S | S.SsuT15ORF6570P (99% identity) | S.Ssu2812ORF9240P | |
| ??? | M | M.SsuTANI1ORF1889P (100% identity) | M.Ssu2812ORF9240P | |
| 9245 | R | SsuTRG6ORF8820P (27% identity) | Ssu2812ORF9240BP | |
| 9250 | IS110 family transposase | |||
| 9255 | R | Ssu2812ORF7305P (100% identity) | Ssu2812ORF9240AP | |
| 9260 | pyridine nucleotide-disulfide oxidoreductase | |||
| 10455 | transposase | |||
| 10460 | R | Ssu4ORF10810P (100% identity) | Ssu2812ORF5765P | |
| 10465 | cell filamentation protein Fic | |||
| 10470 | 1402 aa hypothetical protein | |||
| 10475 | S | S1.SsuAKJ18ORF1640P (100% identity) | S.Ssu2812ORF5765P | |
| 10480 | M | M.Ssu4ORF10810P (100% identity) | M.Ssu2812ORF5765P | |
| 10485 | serine hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1165 | 30S ribosomal protein S9 | |||
| 1170 | M | M.Ssu4ORF1260P (100% identity) | M.Ssu2812ORF2185P | |
| 1175 | restriction endonuclease | |||
| 1170 | methylase | |||
| 1175 | RM | Ssu2812ORF2185AP (99% identity) | Ssu2812ORF1175AP | |
| 1180 | RM | Ssu2812ORF2185BP (91% identity) | Ssu2812ORF1175BP | |
| 1185 | DNA-binding protein | |||
| 1750 | 708 aa hypothetical protein | |||
| 1755 | M | M.Ssu130302ORF8325P (94% identity) | GATC | M.Ssu2812ORF3780P |
| 1760 | 79 aa hypothetical protein | |||
| 4290 | 66 aa hypothetical protein | |||
| 4295 | R | Ssu48ORF2145P (99% identity) | GAATTC | Ssu2812ORF2685P |
| 4300 | M | M.SsuAKJ18ORF8805P (100% identity) | GAATTC | M.Ssu2812ORF2685P |
| 4305 | 428 aa hypothetical protein | |||
| 6255 | 142 aa hypothetical protein | |||
| 6260 | M | M.Ssu4ORF6445P (100% identity) | M.Ssu2812ORF8400P | |
| 6265 | replication initiator protein | |||
| 6535 | 150 aa hypothetical protein | |||
| 6540 | M | M1.SsuTANI1ORF655P (100% identity) | M.Ssu2812ORF6540P | |
| 6545 | DNA (cytosine-5-)-methyltransferase | |||
| 6540 | DNA (cytosine-5-)-methyltransferase | |||
| 6545 | M | M.SsuTRG6ORF5430P (100% identity) | M.Ssu2812ORF6545P | |
| 6550 | 74 aa hypothetical protein | |||
| 8915 | DNA topoisomerase IV subunit A | |||
| 8920 | S | S.SsuAKJ18ORF5795P (36% identity) | S.Ssu2812ORF890P | |
| 8925 | RM | SsuAKJ18ORF5795P (100% identity) | Ssu2812ORF890P | |
| 8930 | GTP pyrophosphokinase | |||
| 11590 | 149 aa hypothetical protein | |||
| 11595 | M | M.Ssu4ORF11820P (100% identity) | M.Ssu2812ORF11590P | |
| 11600 | IS110 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9305 | transposase | |||
| 9310 | R | Ssu4ORF2610P (100% identity) | GCGATD | Ssu2812ORF7575P |
| ??? | M | M.Ssu5ORF2390P (100% identity) | GCGATD | M.Ssu2812ORF7575P |
| 9320 | 203 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5800 | transposase | |||
| 5805 | R | Ssu4McrBP (100% identity) | Ssu2812McrBP | |
| 5810 | R | Ssu4McrCP (100% identity) | Ssu2812McrCP | |
| 5815 | glutamine-hydrolyzing GMP synthase | |||