Xanthomonas vasicola NCPPB 1060 |
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Putative Xanthomonas vasicola NCPPB 1060 RM systems
Ref: Jeffries,A. and Studholme,D.J. unpublished
REBASE ref # 27981
| Sequence length: | GenBank #: | |
| Chromosome: | 4,975,046 bp | CP034649 |
| plasmid pXVH45: | 45,366 bp | CP034651 |
REBASE acronym: Xva1060
Org_num: 32736
All begin NX81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6360 | 65 aa hypothetical protein | |||
| 6365 | S | S.Xca2649ORF4560P (68% identity) | S1.Xva1060ORF6380P | |
| 6370 | IS5 family transposase | |||
| 6375 | S | S1.XhoORFGP (100% identity) | S2.Xva1060ORF6380P | |
| 6380 | M | M.XhoORFGP (100% identity) | M.Xva1060ORF6380P | |
| 6385 | Abi family protein | |||
| 6390 | R | Xca4379ORF16135P (99% identity) | Xva1060ORF6380P | |
| 6395 | 0 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1580 | IS5 family transposase | |||
| 1585 | M | M.XhoORFAP (100% identity) | M.Xva1060ORF1585P | |
| 1590 | 133 aa hypothetical protein | |||
| 5890 | phage portal protein | |||
| 5900 | M | M.Xca793ORF7970P (97% identity) | M.Xva1060ORF5900P | |
| 5905 | 240 aa hypothetical protein | |||
| 12105 | DNA topoisomerase III | |||
| ??? | M | M.XhoORFJP (99% identity) | M.Xva1060ORFAP | |
| 12115 | 70 aa hypothetical protein | |||
| 21250 | 165 aa hypothetical protein | |||
| 21255 | M | M.XspF367ORF1083P (86% identity) | M.Xva1060ORF21255P | |
| 21260 | 877 aa hypothetical protein | |||
| 21480 | 264 aa hypothetical protein | |||
| 21485 | M | M.Xva1601ORF20830P (97% identity) | M.Xva1060ORF21485P | |
| 21490 | DNA adenine methylase | |||
| 21485 | DNA methyltransferase | |||
| 21490 | M | M.Xva1601ORF20835P (100% identity) | TGGCCA | M.Xva1060ORF21490P |
| 21495 | 95 aa hypothetical protein | |||
| plasmid pXVH45 | ||||
| 23420 | conjugal transfer protein TraX | |||
| 23425 | M | M.Xve159ORF23410P (96% identity) | M.Xva1060ORF23425P | |
| 23430 | 152 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 970 | Fic family protein | |||
| 975 | M | M.XvaXGPORFAP (99% identity) | GCCAGG | M.Xva1060ORF975P |
| 980 | R | XhoIIIP (100% identity) | GCCAGG | Xva1060ORF975P |
| 985 | alpha/beta fold hydrolase | |||