Salmonella enterica subsp. enterica serovar Heidelberg 5 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg 5 RM systems
Ref: Mesa,D. and Cardoso,R. unpublished
REBASE ref # 27975
| Sequence length: | GenBank #: | |
| Chromosome: | 4,718,794 bp | CP031359 |
| plasmid p3: | 190,543 bp | CP031362 |
REBASE acronym: SenH5
Org_num: 32717
All begin DXF95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8435 | endoribonuclease SymE | |||
| 8440 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenH5ORF8445P |
| 8445 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenH5ORF8445P |
| 8450 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenH5ORF8445P |
| 8455 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2580 | Fis family transcriptional regulator | |||
| 2585 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenH5ORF2585P |
| 2590 | DUF2556 domain-containing protein | |||
| 3080 | ribulose-phosphate 3-epimerase | |||
| 3085 | M | M.StyTDamP (100% identity) | GATC | M.SenH5DamP |
| 3090 | cell division protein DamX | |||
| 8250 | DEAD/DEAH box helicase | |||
| 8255 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenH5ORF8255P |
| 14390 | DUF4060 family protein | |||
| 14395 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenH5ORF14395P |
| 14400 | exonuclease | |||
| 19680 | drug/metabolite exporter YedA | |||
| 19685 | V | V.StyTDcmP (100% identity) | V.SenH5DcmP | |
| 19690 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenH5DcmP |
| 19695 | phosphohydrolase | |||
| plasmid p3 | ||||
| 24800 | 120 aa hypothetical protein | |||
| 24805 | M | M.Sma1978ORFAP (97% identity) | M.SenH5ORF24805P | |
| 24810 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11120 | MFS transporter | |||
| 11125 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenH5ORF11125P |
| 11130 | R | Sens12373ORF17180P (100% identity) | CAGAG | SenH5ORF11125P |
| 11135 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8450 | type I restriction-modification system | |||
| 8455 | R | StyUK1MrrP (100% identity) | SenH5MrrP | |
| 8460 | BrnT family toxin | |||