Escherichia coli NCTC12655 |
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Putative Escherichia coli NCTC12655 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,757,324 bp
GenBank #: LR134083
REBASE acronym: Eco12655
Org_num: 32692
All begin NCTC12655_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4115 | methylated adenine and cytosine restriction | |||
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | Eco12655IP |
| 4117 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco12655I |
| 4118 | S | S.EcoC13452I (99% identity) | AACNNNNNNGTGC | S.Eco12655I |
| 4120 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 346 | DamX protein | |||
| ??? | M | M.UbaC1152DamP (99% identity) | GATC | M.Eco12655Dam |
| 348 | ribulose-phosphate 3-epimerase | |||
| 480 | membrane protein | |||
| 481 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco12655ORF481P |
| 482 | DNA-binding protein Fis | |||
| 1839 | phosphohydrolase | |||
| 1840 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco12655DcmP |
| 1841 | V | V.SflFF64DcmP (100% identity) | V.Eco12655DcmP | |
| 1842 | DMT superfamily transporter inner | |||
| 3696 | cytoplasmic protein | |||
| 3697 | M | M.SflN92ORF24820P (100% identity) | M.Eco12655ORF3697P | |
| 3698 | YfdA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2712 | isocitrate dehydrogenase | |||
| 2713 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco12655ORF2713P |
| 2714 | DNA invertase from prophage CP-933H | |||
| 4114 | GTP-binding protein YjiA | |||
| 4115 | R | SenHNK130MrrP (100% identity) | Eco12655MrrP | |
| ??? | type I restriction-modification system endonuclease | |||
| 4118 | EcoKI restriction-modification system protein | |||
| ??? | R | Msa17McrB2P (99% identity) | Eco12655McrBP | |
| 4123 | R | SenHNK130McrCP (100% identity) | Eco12655McrCP | |
| 4124 | DEAD-box helicase-like protein | |||