Escherichia coli NCTC9112 |
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Putative Escherichia coli NCTC9112 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 5,468,700 bp
GenBank #: LR134079
REBASE acronym: Eco9112
Org_num: 32699
All begin NCTC9112_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4605 | methylated adenine and cytosine restriction | |||
| 4606 | R | Ecos671ORFCP (100% identity) | CCANNNNNNNCTTT | Eco9112IP |
| 4607 | M | M.Ecos671ORFCP (100% identity) | CCANNNNNNNCTTT | M.Eco9112I |
| 4608 | S | S.EcoR43ORF18375P (100% identity) | CCANNNNNNNCTTT | S.Eco9112I |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 385 | DamX protein | |||
| 386 | M | M.EcoSCU316DamP (100% identity) | GATC | M.Eco9112DamP |
| 387 | ribulose-phosphate 3-epimerase | |||
| 487 | IS1 protein InsB | |||
| 488 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco9112ORF488P |
| 489 | DNA-binding protein Fis | |||
| 863 | diacylglycerol kinase | |||
| 864 | RM | EcoR43ORF19470P (100% identity) | Eco9112ORF864P | |
| ??? | S | S.EcoR43ORF19470P (100% identity) | S.Eco9112ORF864P | |
| 866 | conjugal transfer surface exclusion protein | |||
| 2084 | phosphohydrolase | |||
| 2085 | M | M.EcosNDM5DcmP (100% identity) | CCWGG | M.Eco9112DcmP |
| 2086 | V | V.SsoSE61DcmP (100% identity) | V.Eco9112DcmP | |
| 2087 | DMT superfamily transporter inner | |||
| 2174 | Uncharacterised protein | |||
| 2175 | M | M.EcoR5ORF15805P (100% identity) | M.Eco9112ORF2175P | |
| 2176 | Uncharacterised protein | |||
| 3021 | TolA protein (fragment) of prophage | |||
| 3024 | M | M.EcoSCU103ORF10815P (100% identity) | M.Eco9112ORF3024P | |
| 3025 | lipoprotein | |||
| 3028 | phage protein | |||
| 3029 | R | EcoR43ORF25195P (100% identity) | GCCGGC | Eco9112IIP |
| ??? | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.Eco9112II |
| 3031 | prophage protein | |||
| 3393 | TciA/TerB-like protein | |||
| 3397 | M | M.EcoS792ORF4000P (100% identity) | M.Eco9112ORF3397P | |
| 3398 | lipoprotein | |||
| 4564 | LexA repressor | |||
| 4565 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco9112ORF4565P |
| 4566 | replication protein from phage (modular | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4604 | GTP-binding protein YjiA | |||
| 4605 | R | Ssp28760MrrP (100% identity) | Eco9112MrrP | |
| 4606 | type I restriction enzyme EcoKI subunit R | |||