Campylobacter lari RM2100 |
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Putative Campylobacter lari RM2100 RM systems
Ref: Miller,W.G. et al. Foodborne Pathog. Dis. 5 (4), 371-386 (2008)
REBASE ref # 10935
Complete sequence: 1,525,460 bp
GenBank #: CP000932 (NC_012039)
REBASE acronym: ClaR
Org_num: 4112
All begin Cla_, CLA_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 343 | zinc-dependent alcohol dehydrogenase | |||
| 344 | R | Cla00ORF1800P (97% identity) | ClaRORF349P | |
| 345 | 200 aa hypothetical protein | |||
| 346 | 262 aa hypothetical protein | |||
| 347 | S | S.Cje11925I (86% identity) | S.ClaRORF349P | |
| 348 | virulence protein, RhuM family | |||
| 349 | M | M.Cje6454ORF5250P (92% identity) | M.ClaRORF349P | |
| 350 | molybdopterin molybdenumtransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 29 | translation initiation factor IF-3 | |||
| 30 | M | M.Cla8846ORF31P (100% identity) | GAATTC | M.ClaRORF30P |
| 31 | transcriptional regulator (WYL domain) | |||
| 557 | acyl-CoA thioesterase | |||
| 558 | RM | Cpe74ORF5755P (66% identity) | ClaRORF558P | |
| 559 | protein disulfide oxidoreductase | |||
| 1455 | membrane protein | |||
| 1456 | RM | Cla10973ORF13620P (91% identity) | ClaRORF1457P | |
| 1457 | molybdopterin-containing oxidoreductase II, | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 224 | 140 aa hypothetical protein (DUF150 domain) | |||
| 225 | R | 208 aa hypothetical protein, putative endonuclease | ClaRMcrB2P | |
| 227 | diaminohydroxyphosphoribosylaminopyrimidine | |||
| 878 | 230 aa hypothetical protein | |||
| 879 | R | ClaSCHS02McrCP (95% identity) | ClaRMcrCP | |
| 880 | R | ClaSCHS02McrBP (91% identity) | ClaRMcrBP | |
| 881 | 187 aa hypothetical protein | |||