Haemophilus influenzae NCTC11873 |
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Putative Haemophilus influenzae NCTC11873 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 1,948,880 bp
GenBank #: LR134490
REBASE acronym: Hin11873
Org_num: 32635
All begin NCTC11873_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 422 | ATP-dependent DNA helicase Rep | |||
| 423 | R | Hin8883ORF8820P (100% identity) | TTGANNNNNNNTTYG | Hin11873IIP |
| 424 | S | S.Hin8883ORF8820P (100% identity) | TTGANNNNNNNTTYG | S.Hin11873II |
| 425 | M | M.Hin8883ORF8820P (87% identity) | TTGANNNNNNNTTYG | M.Hin11873II |
| 426 | SAM-dependent methyltransferase | |||
| 856 | inner membrane protein | |||
| ??? | R | Aur10221ORF467P (98% identity) | Hin11873ORF862P | |
| 859 | Abi family protein | |||
| 860 | S | S1.Hin3043ORF5600P (99% identity) | S1.Hin11873ORF862P | |
| 861 | S | S.Hin375II (47% identity) | S2.Hin11873ORF862P | |
| 862 | M | M.Hin375II (100% identity) | M.Hin11873ORF862P | |
| 863 | oligopeptidase A | |||
| 1020 | Signal Recognition Particle (SRP) component with | |||
| 1021 | R | Hin3047ORF3790P (98% identity) | ATGNNNNNNGTC | Hin11873IP |
| 1022 | S | S.HinNTHORFYP (67% identity) | ATGNNNNNNGTC | S.Hin11873I |
| 1023 | transcriptional regulator containing an hth | |||
| 1024 | M | M.HinII4ORF8830P (100% identity) | ATGNNNNNNGTC | M.Hin11873I |
| 1025 | NIF3-like protein | |||
| 1367 | translation initiation factor IF-2 | |||
| 1368 | R | HinIII7ORF12840P (98% identity) | Hin11873ORF1373P | |
| 1369 | Uncharacterised protein | |||
| 1370 | Uncharacterised protein | |||
| 1371 | FRG domain | |||
| 1372 | S | S.HinP3EMOORF3665P (62% identity) | S.Hin11873ORF1373P | |
| ??? | M | M.Hin7661ORF6515P (99% identity) | M.Hin11873ORF1373P | |
| 1374 | 30s ribosome binding factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1357 | Uncharacterised protein | |||
| 1358 | M | M.Hin1900002ORF735P (99% identity) | M.Hin11873ORF1358P | |
| 1359 | Probable bacteriophage replication protein A | |||
| 1519 | protein involved in chromosome partitioning | |||
| 1520 | R | HinV1ORF15060P (100% identity) | RGCGCY | Hin11873ORF1521P |
| 1521 | M | M.HinV1ORF15060P (100% identity) | RGCGCY | M.Hin11873ORF1521P |
| 1522 | condesin subunit F | |||
| 1644 | phage replication protein | |||
| 1645 | M | M.Hin8759ORF7955P (100% identity) | M.Hin11873ORF1645P | |
| 1646 | recombination protein NinB | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 371 | regulator of ribonuclease activity B | |||
| 372 | R | HinV2ORF3260P (100% identity) | Hin11873ORF373P | |
| 373 | M | M.HinV3ORF3780P (100% identity) | M.Hin11873ORF373P | |
| 374 | type iii restriction-modification system | |||
| 1904 | ribonuclease HII, degrades RNA of DNA-RNA | |||
| 1905 | M | M.Hin2866I (99% identity) | CCTAC | M.Hin11873III |
| 1906 | R | HinV3ORF18120P (100% identity) | CCTAC | Hin11873IIIP |
| 1907 | gamma-carboxymuconolactone decarboxylase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 867 | phosphatidylglycerophosphatase B | |||
| 868 | M | M.HinV1ORF8910P (100% identity) | GATC | M.Hin11873ORF868P |
| 869 | 3-dehydroquinate synthase | |||
| 966 | Uncharacterised protein | |||
| 967 | M | M.HinV3ORF10190P (100% identity) | GATC | M.Hin11873ORF967P |
| 968 | Antitoxin HicB | |||