Yersinia pseudotuberculosis NCTC10275 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Yersinia pseudotuberculosis NCTC10275 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,610,200 bp
GenBank #: LR134373
REBASE acronym: Yps10275
Org_num: 32532
All begin NCTC10275_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 64 | Type I restriction modification DNA specificity | |||
| 65 | M | M.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | M.Yps10275I |
| 66 | S | S1.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | S.Yps10275I |
| 67 | Virulence protein | |||
| 68 | R | YpsST42ORFAP (100% identity) | TGACNNNNNCTC | Yps10275IP |
| 69 | metal-dependent hydrolase | |||
| 3551 | M48 peptidase family protein | |||
| 3552 | M | M.YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | M.Yps10275II |
| 3553 | S | S.YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | S.Yps10275II |
| 3554 | R | YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | Yps10275IIP |
| 3555 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 210 | membrane protein, interferes with cell division | |||
| 211 | M | M.Ysi228DamP (100% identity) | GATC | M.Yps10275DamP |
| 212 | ribulose-phosphate 3-epimerase | |||
| 2187 | Orf81 bacteriophage 186 | |||
| 2188 | M | M.YpsM89ORF15220P (91% identity) | M.Yps10275ORF2188P | |
| 2189 | C-5 cytosine-specific DNA methylase | |||
| 3219 | phage replication protein | |||
| 3220 | M | M.YpsMD67ORF59P (100% identity) | M.Yps10275ORF3220P | |
| 3221 | Orf81 bacteriophage 186 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 69 | metal-dependent hydrolase | |||
| 70 | R | YpsYpse1MrrP (100% identity) | Yps10275MrrP | |
| 71 | Protein of uncharacterised function (DUF3296) | |||