Shewanella putrefaciens NCTC12093 |
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Putative Shewanella putrefaciens NCTC12093 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 5,049,396 bp
GenBank #: LR134303
REBASE acronym: Spu12093
Org_num: 32386
All begin NCTC12093_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 576 | recombination protein F | |||
| 577 | R | Spu200ORF3878P (97% identity) | CGANNNNNNGTC | Spu12093IIP |
| 578 | Protein involved in cell division | |||
| 579 | S | S.Spu200ORF3878P (100% identity) | CGANNNNNNGTC | S.Spu12093II |
| 580 | M | M.Spu200ORF3878P (100% identity) | CGANNNNNNGTC | M.Spu12093II |
| 581 | EcoKMrr | |||
| 2937 | Uncharacterised protein | |||
| 2938 | M | M.VchSXTORFAP (100% identity) | M.Spu12093ORF2938P | |
| 2939 | S | S.VchSXTORFAP (100% identity) | S.Spu12093ORF2938P | |
| 2940 | BstXI restriction endonuclease | |||
| 2941 | R | SpuJNE7ORF15505P (100% identity) | Spu12093ORF2938P | |
| 2942 | 5-methylcytosine-specific restriction enzyme B | |||
| 3867 | Uncharacterised protein | |||
| 3868 | M | M.SbiJAB1ORF11595P (100% identity) | AGCNNNNNNRGTA | M.Spu12093I |
| 3869 | S | S.SbiJAB1ORF11595P (93% identity) | AGCNNNNNNRGTA | S.Spu12093I |
| 3870 | Uncharacterised protein | |||
| 3871 | Uncharacterized conserved protein | |||
| 3872 | Uncharacterized conserved protein | |||
| 3873 | R | SpuSA70ORF19675P (99% identity) | AGCNNNNNNRGTA | Spu12093IP |
| 3874 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1485 | Uncharacterised protein | |||
| 1486 | R | Ssp53532ORF17865P (80% identity) | Spu12093ORF1487P | |
| 1487 | M | M.Ssp52076ORF1435P (82% identity) | M.Spu12093ORF1487P | |
| 1488 | mobile mystery protein B | |||
| 1572 | Protein of uncharacterised function (DUF2970) | |||
| 1573 | M | M.SspMR4DamP (100% identity) | GATC | M.Spu12093Dam |
| 1574 | Uncharacterized protein conserved in bacteria | |||
| 4119 | Uncharacterised protein | |||
| 4120 | RM | Cfr2785ORF4431AP (80% identity) | Spu12093ORF4120AP | |
| 4121 | Uncharacterised protein | |||
| 4122 | Reverse transcriptase (RNA-dependent DNA | |||
| 4123 | Uncharacterised protein | |||
| 4124 | RM | Ahy45096ORF7720BP (62% identity) | Spu12093ORF4120BP | |
| 4125 | PglZ domain | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 580 | Type I restriction enzyme EcoKI M protein | |||
| 581 | R | SspHN41MrrP (98% identity) | Spu12093MrrP | |
| 582 | Uncharacterised protein | |||
| 2941 | Type I restriction enzyme EcoR124II R protein | |||
| 2942 | R | SpuJNE7McrBP (100% identity) | Spu12093McrBP | |
| 2943 | R | VchSXTMcrCP (100% identity) | Spu12093McrCP | |
| 2944 | EcoKMrr | |||
| 2943 | 5-methylcytosine-specific restriction enzyme | |||
| 2944 | R | Vch216MrrP (100% identity) | Spu12093Mrr2P | |
| 2945 | Uncharacterised protein | |||