Escherichia coli NCTC9088 |
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Putative Escherichia coli NCTC9088 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,736,671 bp
GenBank #: LR134226
REBASE acronym: Eco9088
Org_num: 32345
All begin NCTC9088_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3965 | Uncharacterised protein | |||
| 3966 | M | M.EcoSTEC866ORF20040P (100% identity) | CCAYNNNNNTGT | M.Eco9088I |
| 3967 | S | S.EcoSTEC640ORF20915P (100% identity) | CCAYNNNNNTGT | S.Eco9088I |
| 3968 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 347 | DamX protein | |||
| 348 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9088Dam |
| 349 | ribulose-phosphate 3-epimerase | |||
| 461 | membrane protein | |||
| 462 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco9088ORF462P |
| 463 | DNA-binding protein Fis | |||
| 1799 | phosphohydrolase | |||
| 1800 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.Eco9088DcmP |
| 1801 | V | V.SsoSE61DcmP (100% identity) | V.Eco9088DcmP | |
| 1802 | DMT superfamily transporter inner | |||
| 2892 | phage capsid protein | |||
| ??? | M | M.Ecostr10ORF20P (100% identity) | M.Eco9088ORF2893P | |
| ??? | C | C.Ecostr10ORF20P (100% identity) | C.Eco9088ORF2893P | |
| 2894 | R | Ecostr10ORF20P (100% identity) | GRGCYC | Eco9088ORF2893P |
| 2895 | Replication gene A protein (GpA) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3962 | restriction endonuclease | |||
| 3963 | R | SflN101McrBP (100% identity) | Eco9088McrBP | |
| 3964 | R | SflN101McrCP (100% identity) | Eco9088McrCP | |
| 3965 | Uncharacterised protein | |||