Haemophilus influenzae NCTC12699 |
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Putative Haemophilus influenzae NCTC12699 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 1,879,945 bp
GenBank #: LR134171
REBASE acronym: Hin12699
Org_num: 32354
All begin NCTC12699_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 495 | inner membrane protein | |||
| 496 | R | HinIII1ORF8070P (98% identity) | Hin12699ORF499P | |
| 497 | Abi family protein | |||
| 498 | S | S.HinP3EMOORF7185P (96% identity) | S.Hin12699ORF499P | |
| 499 | M | M.HinP3EMOORF7185P (100% identity) | M.Hin12699ORF499P | |
| 500 | oligopeptidase A | |||
| 685 | Signal Recognition Particle (SRP) component with | |||
| 686 | R | HinIV1ORF8720P (99% identity) | AGTNNNNNNCGT | Hin12699IVP |
| 687 | S | S.HinIV1ORF8720P (100% identity) | AGTNNNNNNCGT | S.Hin12699IV |
| 688 | DNA binding protein | |||
| 689 | M | M.HinIV1ORF8720P (99% identity) | AGTNNNNNNCGT | M.Hin12699IV |
| 690 | NIF3-like protein | |||
| 983 | translation initiation factor IF-2 | |||
| 984 | R | HinP3EMOORF3665P (99% identity) | TAAYNNNNNTGC | Hin12699IIIP |
| 985 | Uncharacterised protein | |||
| 986 | S | S.HinP3EMOORF3665P (65% identity) | TAAYNNNNNTGC | S.Hin12699III |
| 987 | M | M.Hin15895ORFDP (98% identity) | TAAYNNNNNTGC | M.Hin12699III |
| 988 | 30s ribosome binding factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 855 | choline transporter of high affinity | |||
| 856 | RM | RM3.Hin493ORFAP (97% identity) | Hin12699ORF856P | |
| 857 | M | M1.HinII8ORF10560P (100% identity) | M1.Hin12699ORF856P | |
| 858 | M | M2.HinII8ORF10560P (87% identity) | M2.Hin12699ORF856P | |
| 859 | Uncharacterised protein | |||
| 1050 | valyl-tRNA synthetase | |||
| 1051 | M | M.HinIII8ORF12360P (99% identity) | AAGCTT | M.Hin12699I |
| 1052 | R | HindNIII (99% identity) | AAGCTT | Hin12699IP |
| 1053 | ASCH domain | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1460 | ribonuclease HII, degrades RNA of DNA-RNA | |||
| 1461 | M | M.HinII8ORF17810P (100% identity) | M.Hin12699ORF1461P | |
| 1462 | R | HinII8ORF17810P (99% identity) | Hin12699ORF1461P | |
| 1463 | gamma-carboxymuconolactone decarboxylase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 504 | phosphatidylglycerophosphatase B | |||
| 505 | M | M.HinIV1ORF7710P (99% identity) | GATC | M.Hin12699II |
| 506 | 3-dehydroquinate synthase | |||