Salmonella enterica subsp. enterica NCTC6017 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica NCTC6017 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,737,887 bp
GenBank #: LR134145
REBASE acronym: SenC6017
Org_num: 32437
All begin NCTC6017_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4624 | restriction endonuclease | |||
| 4625 | R | SenAboIVP (100% identity) | SenC6017ORF4626P | |
| ??? | M | M.SenAboIV (100% identity) | M.SenC6017ORF4626P | |
| ??? | S | S.SenSP5ORF3890P (35% identity) | S1.SenC6017ORF4626P | |
| 4627 | S | S.SenAboIV (64% identity) | S2.SenC6017ORF4626P | |
| 4629 | membrane protein | |||
| 4663 | type I restriction-modification system, M | |||
| 4664 | R | SenHL21ORF19875P (100% identity) | SenC6017ORF4665P | |
| ??? | S | S.SenHL21ORF19875P (67% identity) | S1.SenC6017ORF4665P | |
| ??? | S | S.SenHL21ORF19875P (33% identity) | S2.SenC6017ORF4665P | |
| ??? | M | M2.SenAboIII (100% identity) | M2.SenC6017ORF4665P | |
| 4666 | M | M1.SenSA5ORF17266P (100% identity) | M1.SenC6017ORF4665P | |
| 4667 | TIR protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 447 | DamX protein | |||
| 448 | M | M.StyTDamP (100% identity) | GATC | M.SenC6017DamP |
| 449 | ribulose-phosphate 3-epimerase | |||
| 559 | protein yhdU | |||
| 560 | M | M.SenS922ORF2265P (100% identity) | ATGCAT | M.SenC6017ORF560P |
| 561 | Fis DNA-binding protein | |||
| 2150 | metal-dependent phospho hydrolase | |||
| ??? | M | M.SspZ69DcmP (99% identity) | M.SenC6017DcmP | |
| 2153 | V | V.StyUK1DcmP (100% identity) | V.SenC6017DcmP | |
| 2154 | inner membrane transporter yedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4047 | cytoplasmic protein | |||
| 4048 | R | SenAboIP (99% identity) | CAGAG | SenC6017ORF4049P |
| 4049 | M | M.SenAboI (100% identity) | CAGAG | M.SenC6017ORF4049P |
| 4050 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4623 | membrane protein | |||
| 4624 | R | SenSPBMrrP (100% identity) | SenC6017Mrr2P | |
| 4625 | type I restriction enzyme EcoKI subunit R | |||