Iodobacter species H11R3 |
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Putative Iodobacter species H11R3 RM systems
Ref: Bae,J.-W. unpublished
REBASE ref # 26826
Complete sequence: 3,877,377 bp
GenBank #: CP034433
REBASE acronym: Isph11r3
Org_num: 32205
All begin EJO50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2665 | 301 aa hypothetical protein | |||
| 2670 | R | CspKYYJ3ORF6105P (70% identity) | CTANNNNNNNTAAAG | Isph11r3IP |
| 2675 | S | S.CpeA191ORF8050P (34% identity) | CTANNNNNNNTAAAG | S.Isph11r3I |
| 2680 | M | M.Vbr29ORFAP (77% identity) | CTANNNNNNNTAAAG | M.Isph11r3I |
| 2685 | sigma-54-dependent Fis family transcriptional | |||
| 4080 | DUF839 domain-containing protein | |||
| 4090 | M | M.DspD13ORF11305P (82% identity) | GAAYNNNNNNTCC | M.Isph11r3II |
| 4095 | S | S.XneXORFGP (61% identity) | GAAYNNNNNNTCC | S.Isph11r3II |
| 4100 | cell filamentation protein Fic | |||
| 4105 | endonuclease domain-containing protein | |||
| 4110 | R | DspD13ORF11305P (81% identity) | GAAYNNNNNNTCC | Isph11r3IIP |
| 4115 | 182 aa hypothetical protein | |||
| 8355 | response regulator | |||
| 8360 | R | CteG1ORF2055P (73% identity) | Isph11r3ORF8370P | |
| 8365 | S | S.PdaP85ORF11195P (46% identity) | S.Isph11r3ORF8370P | |
| 8370 | M | M.Ifl194ORF19595P (85% identity) | M.Isph11r3ORF8370P | |
| 8375 | IS5/IS1182 family transposase | |||
| 9620 | M48 family peptidase | |||
| 9625 | R | Csp2T18ORF11305P (89% identity) | TGAAYNNNNNGRT | Isph11r3IIIP |
| 9630 | ATP-dependent helicase | |||
| 9635 | DUF2813 domain-containing protein | |||
| 9640 | S | S.Lpn12179II (50% identity) | TGAAYNNNNNGRT | S.Isph11r3III |
| 9645 | M | M.Csp2T18ORF11305P (92% identity) | TGAAYNNNNNGRT | M.Isph11r3III |
| 9650 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | type II toxin-antitoxin system RelE/ParE family | |||
| 40 | RM | Esp024ORF4760P (72% identity) | Isph11r3ORF40P | |
| 45 | 262 aa hypothetical protein | |||
| 2870 | phage tail tape measure protein | |||
| 2875 | M | M.JspB98ORF12595P (91% identity) | M.Isph11r3ORF2875P | |
| 2880 | GpE family phage tail protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13960 | helix-turn-helix domain-containing protein | |||
| 13965 | M | M.AfaJ481ORF6790P (22% identity) | M.Isph11r3ORF13965AP | |
| 13970 | IS5 family transposase | |||
| 13975 | M | M.AspAMDIII (30% identity) | M.Isph11r3ORF13965BP | |
| 13980 | R | PpuTs1ORF3570P (54% identity) | Isph11r3ORF13965P | |
| 13985 | DEAD/DEAH box helicase | |||