Escherichia coli WPB121 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli WPB121 RM systems
Ref: Chen,H. unpublished
REBASE ref # 20595
Complete sequence: 4,637,028 bp
GenBank #: CP034426
REBASE acronym: EcoB121
Org_num: 32198
All begin EJP76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22170 | endoribonuclease SymE | |||
| 22175 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoB121ORF22180P |
| 22180 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoB121ORF22180P |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | EcoB121ORF22180P |
| 22190 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10100 | drug/metabolite exporter YedA | |||
| 10105 | V | V.SflFF64DcmP (100% identity) | V.EcoB121DcmP | |
| 10110 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoB121DcmP |
| 10115 | phosphohydrolase | |||
| 16620 | DNA-binding transcriptional regulator Fis | |||
| 16625 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoB121ORF16625P |
| 16630 | DUF2556 domain-containing protein | |||
| 19875 | protein DamX | |||
| 19880 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoB121DamP |
| 19885 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5860 | recombinase family protein | |||
| 5865 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoB121ORF5865P |
| 5870 | isocitrate dehydrogenase | |||
| 22155 | 906 aa hypothetical protein | |||
| 22160 | R | SenHNK130McrCP (100% identity) | EcoB121McrCP | |
| 22165 | R | SenHNK130McrBP (100% identity) | EcoB121McrBP | |
| 22170 | endoribonuclease SymE | |||
| ??? | type I restriction-modification system endonuclease | |||
| 22190 | R | SenHNK130MrrP (100% identity) | EcoB121MrrP | |
| 22195 | GTPase | |||