Salmonella enterica subsp. enterica serovar Derby Sa64 |
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Putative Salmonella enterica subsp. enterica serovar Derby Sa64 RM systems
Ref: Chen,K. and Chen,S. unpublished
REBASE ref # 27846
| Sequence length: | GenBank #: | |
| Chromosome: | 4,824,198 bp | CP034250 |
| plasmid pSa64-96: | 96,517 bp | CP034252 |
| plasmid pSa64T-188: | 188,966 bp | CP034251 |
REBASE acronym: Sen64
Org_num: 32136
All begin EIC79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19305 | 322 aa hypothetical protein | |||
| 19310 | R | SensTJX21ORF11885P (99% identity) | TACNNNNNNNGTTC | Sen64ORF19315P |
| 19315 | M | M.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | M.Sen64ORF19315P |
| 19320 | S | S.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | S.Sen64ORF19315P |
| 19325 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 540 | cell division protein DamX | |||
| 545 | M | M.StyTDamP (99% identity) | GATC | M.Sen64DamP |
| 550 | ribulose-phosphate 3-epimerase | |||
| 1025 | DUF2556 domain-containing protein | |||
| 1030 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen64ORF1030P |
| 1035 | DNA-binding transcriptional regulator Fis | |||
| 2010 | DUF1173 family protein | |||
| 2015 | M | M.YpsF1ORFCP (100% identity) | M.Sen64ORF2015P | |
| 2020 | thermonuclease family protein | |||
| 13240 | drug/metabolite exporter YedA | |||
| 13245 | V | V.StyUK1DcmP (99% identity) | V.Sen64DcmP | |
| 13250 | M | M.SensTJX21DcmP (99% identity) | CCWGG | M.Sen64DcmP |
| 13255 | phosphohydrolase | |||
| 17095 | phage holin, lambda family | |||
| 17100 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen64ORF17100P | |
| 17105 | 92 aa hypothetical protein | |||
| 17130 | LexA family transcriptional regulator | |||
| 17135 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Sen64ORF17135P |
| 17140 | PerC family transcriptional regulator | |||
| 19505 | RM | SensTJX21ORF12050P (100% identity) | Sen64ORF19505P | |
| 19510 | DEAD/DEAH box helicase | |||
| plasmid pSa64-96 | ||||
| 25625 | 0 aa hypothetical protein | |||
| 25630 | M | M.SspPIBORF23080P (100% identity) | M.Sen64ORF25630P | |
| 25635 | 73 aa hypothetical protein | |||
| plasmid pSa64T-188 | ||||
| 24305 | 73 aa hypothetical protein | |||
| 24310 | M | M.SspPIBORF23080P (100% identity) | M.Sen64ORF24310P | |
| 24315 | 0 aa hypothetical protein | |||
| 24545 | DUF1173 family protein | |||
| 24550 | M | M.YpsF1ORFCP (100% identity) | M.Sen64ORF24550P | |
| 24555 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16735 | 33 aa hypothetical protein | |||
| 16740 | R | StyUK1IP (99% identity) | Sen64ORF16745P | |
| 16745 | M | M.Sen61414ORF17215P (98% identity) | M.Sen64ORF16745P | |
| 16750 | MFS transporter | |||