Salmonella enterica subsp. enterica serovar Typhimurium ATCC 14028 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ATCC 14028 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
| Sequence length: | GenBank #: | |
| Chromosome: | 4,869,644 bp | CP034230 |
| plasmid pATCC14028: | 95,924 bp | CP034231 |
REBASE acronym: Sen4028
Org_num: 32137
All begin EIL76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20840 | restriction endonuclease | |||
| 20845 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4028ORF20850P |
| 20850 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen4028ORF20850P |
| 20855 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4028ORF20850P |
| 20860 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1845 | cell division protein DamX | |||
| 1850 | M | M.StyTDamP (100% identity) | GATC | M.Sen4028Dam |
| 1855 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 domain-containing protein | |||
| 2345 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4028ORF2345P |
| 2350 | DNA-binding transcriptional regulator Fis | |||
| 6125 | ead/Ea22-like family protein | |||
| 6130 | M | M.Sens29958ORF6205P (100% identity) | M.Sen4028ORF6130P | |
| 6135 | DUF550 domain-containing protein | |||
| 10430 | drug/metabolite exporter YedA | |||
| 10435 | V | V.StyUK1DcmP (100% identity) | V.Sen4028DcmP | |
| 10440 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4028DcmP |
| 10445 | phosphohydrolase | |||
| 10685 | RusA family crossover junction | |||
| 10690 | M | M.StyUK1V (100% identity) | GATC | M.Sen4028ORF10690P |
| 10695 | PerC family transcriptional regulator | |||
| 14125 | DUF550 domain-containing protein | |||
| 14130 | M | M.Sens29958ORF6205P (100% identity) | M.Sen4028ORF14130P | |
| 14135 | ead/Ea22-like family protein | |||
| 21020 | BREX system P-loop protein BrxC | |||
| 21025 | RM | StyUK1IV (100% identity) | GATCAG | Sen4028ORF21025P |
| 21030 | ATP-binding protein | |||
| plasmid pATCC14028 | ||||
| 25015 | 62 aa hypothetical protein | |||
| 25020 | M | M.StyUK1ORFAP (100% identity) | M.Sen4028ORF25020P | |
| 25025 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18610 | 33 aa hypothetical protein | |||
| 18615 | R | StyUK1IP (99% identity) | CAGAG | Sen4028ORF18620P |
| 18620 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4028ORF18620P |
| 18625 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20835 | BrnT family toxin | |||
| 20840 | R | StyUK1MrrP (100% identity) | Sen4028MrrP | |
| 20845 | type I restriction-modification system | |||