Escherichia coli 2/0 |
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Putative Escherichia coli 2/0 RM systems
Ref: Sandegren,L. unpublished
REBASE ref # 27796
| Sequence length: | GenBank #: | |
| Chromosome: | 5,174,317 bp | CP023853 |
| plasmid p2_0.1: | 135,053 bp | CP023854 |
REBASE acronym: EcoS20
Org_num: 32056
All begin CRT29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1560 | 52 aa hypothetical protein | |||
| 1565 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS20ORF1570P |
| 1570 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS20ORF1570P |
| 1575 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS20ORF1570P |
| 1580 | 267 aa hypothetical protein | |||
| 24415 | DNA-binding protein | |||
| 24420 | M | M.Pre393ORF2750P (100% identity) | M.EcoS20ORF24420P | |
| 24425 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoS20ORF24420P | |
| 24430 | RecQ family ATP-dependent DNA helicase | |||
| 24435 | DNA-processing protein DprA | |||
| 24440 | R | EcotcmA3ORF16550P (100% identity) | EcoS20ORF24420P | |
| 24445 | IS3 family transposase | |||
| 26490 | endoribonuclease SymE | |||
| 26495 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoS20ORF26505P |
| 26500 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoS20ORF26505P |
| 26505 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoS20ORF26505P |
| 26510 | restriction endonuclease | |||
| plasmid p2_0.1 | ||||
| 27635 | type II toxin-antitoxin system | |||
| 27640 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNCTGG | M.EcoS20ORF27640P |
| 27645 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoS20ORF27640P |
| 27650 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNCTGG | EcoS20ORF27640P |
| 27655 | glycosyl transferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5595 | 71 aa hypothetical protein | |||
| 5600 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS20ORF5600P | |
| 5605 | XRE family transcriptional regulator | |||
| 8005 | TrmB family transcriptional regulator | |||
| 8010 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoS20ORF8010P |
| 8025 | 108 aa hypothetical protein | |||
| 11760 | drug/metabolite exporter YedA | |||
| 11765 | V | V.SflC32DcmP (74% identity) | V.EcoS20DcmP | |
| 11770 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS20DcmP |
| 11775 | phosphohydrolase | |||
| 15030 | 355 aa hypothetical protein | |||
| 15035 | M | M.Sdy9753ORFBP (97% identity) | M.EcoS20ORF15035P | |
| 15040 | 64 aa hypothetical protein | |||
| 19515 | Fis family transcriptional regulator | |||
| 19520 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS20ORF19520P |
| 19525 | transporter | |||
| 20150 | ribulose-phosphate 3-epimerase | |||
| 20155 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS20DamP |
| 20160 | cell division protein DamX | |||
| 21785 | BREX system P-loop protein BrxC | |||
| 21790 | RM | EcosR9ORF15335P (99% identity) | CANCATC | EcoS20ORF21790P |
| 21795 | BREX-1 system phosphatase PglZ type A | |||
| 26100 | 0 aa hypothetical protein | |||
| 26105 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoS20ORF26105P |
| 26110 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS20ORF26105P |
| 26115 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS20ORF26105P |
| 26120 | restriction endonuclease | |||
| plasmid p2_0.1 | ||||
| 26845 | 0 aa hypothetical protein | |||
| 26850 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS20ORF26850P |
| 26855 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26115 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 26120 | R | EcosS9McrCP (100% identity) | EcoS20McrCP | |
| 26125 | R | EcosS3McrBP (100% identity) | EcoS20McrBP | |
| 26130 | 60 aa hypothetical protein | |||