Bifidobacterium bifidum DS33_23 |
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Putative Bifidobacterium bifidum DS33_23 RM systems
Ref: Barnaba,T.J. et al. Genome Announc 6 (26), e00610-18 (2018)
REBASE ref # 27060
Contig set: 2,229,571 bp
GenBank #: QDIH00000000 (NZ_QDIH00000000)
REBASE acronym: Bbi3323
Org_num: 31789
All begin DD684_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1800 | S | S2.Ban3123ORF8640P (100% identity) | S1.Bbi3323ORF1815P | |
| 1805 | 68 aa hypothetical protein | |||
| 1810 | DUF4357 domain-containing protein | |||
| 1815 | M | M.BspTKUORF5680P (100% identity) | M.Bbi3323ORF1815P | |
| 1820 | S | S1.BspTKUORF5680P (100% identity) | S2.Bbi3323ORF1815P | |
| ??? | R | BbiPRI1ORFEP (100% identity) | Bbi3323ORF1815P | |
| 1835 | argininosuccinate lyase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7435 | RM | BspTKUORF7035P (100% identity) | Bbi3323ORF7435P | |
| 7440 | S | S.PmeBin303ORFCP (100% identity) | S.Bbi3323ORF7435P | |
| 7445 | aldehyde dehydrogenase family protein | |||
| 3140 | site-specific integrase | |||
| 3145 | M | M.PmeBin303ORFDP (100% identity) | M.Bbi3323ORF3145P | |
| 3150 | R | PmeBin303ORFDP (100% identity) | Bbi3323ORF3145P | |
| 3155 | 290 aa hypothetical protein | |||
| 5845 | beta-galactosidase | |||
| 5850 | R | BbiVSI20ORF1105P (93% identity) | R1.Bbi3323ORF5850P | |
| ??? | R | 203 aa hypothetical protein | R2.Bbi3323ORF5850P | |
| 5860 | 50 aa hypothetical protein | |||
| 5695 | type II toxin-antitoxin system RelB/DinJ family | |||
| 5700 | M | M.BspTKUORF1745P (100% identity) | M.Bbi3323ORF5700P | |
| 5705 | R | BspTKUORF1745P (99% identity) | Bbi3323ORF5700P | |
| 5710 | translation repressor RelB | |||
| 7205 | GTPase HflX | |||
| 7210 | R | PmeBin303ORFBP (100% identity) | C | Bbi3323ORF7210P |
| 7215 | methyltransferase domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8115 | restriction endonuclease | |||
| ??? | M | M.BbiPRI1ORFIP (100% identity) | M.Bbi3323ORF8120P | |
| 8130 | helicase | |||