Vibrio cholerae E4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio cholerae E4 RM systems
Ref: Carraro,N. et al. Front Microbiol 5, 44 (2014)
REBASE ref # 27703
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,075,249 bp | CP033515 |
| chromosome 2: | 1,046,445 bp | CP033513 |
| plasmid pVCR94: | 171,829 bp | CP033514 |
REBASE acronym: VchE4
Org_num: 31696
All begin EEL44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 12090 | 687 aa hypothetical protein | |||
| 12095 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.VchE4I |
| 12100 | S | S.VchW413ORF6655P (100% identity) | AAGNNNNNNCATC | S.VchE4I |
| 12105 | DUF262 domain-containing protein | |||
| 12110 | DUF262 domain-containing protein | |||
| 12115 | R | VchW413ORF6655P (100% identity) | AAGNNNNNNCATC | VchE4IP |
| 12120 | 706 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7870 | cell division protein DamX | |||
| 7875 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchE4DamP |
| 7880 | ribulose-phosphate 3-epimerase | |||
| 17895 | PglZ domain-containing protein | |||
| 17900 | RM | VchPC1ORF10795P (100% identity) | RTAAAYG | VchE4II |
| 17905 | BREX system P-loop protein BrxC | |||
| chromosome 2 | ||||
| 910 | 141 aa hypothetical protein | |||
| 915 | M | M.VspNIH41ORF3529P (100% identity) | M.VchE4ORF915P | |
| 920 | hemagglutinin | |||
| 2080 | DUF262 domain-containing protein | |||
| 2085 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.VchE4ORF2085P |
| 2090 | guanosine monophosphate reductase | |||
| plasmid pVCR94 | ||||
| 5635 | 100 aa hypothetical protein | |||
| 5640 | M | M.YrupYR1ORFCP (100% identity) | M.VchE4ORF5640P | |
| 5645 | 158 aa hypothetical protein | |||