|
Putative Salmonella enterica subsp. enterica serovar Typhi 311189_201186 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Sequence length: | GenBank #: | |
Chromosome: | 4,783,542 bp | CP029958 |
plasmid pHCM1: | 216,847 bp | CP029957 |
REBASE acronym: Sen201186
Org_num: 31664
All begin SM201186_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6062 | endoribonuclease SymE | |||
6064 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen201186ORF6064P |
??? | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen201186ORF6064P |
6067 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen201186ORF6064P |
6065 | mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1537 | bacteriophage protein | |||
1532 | M | M.StyTORF1926P (100% identity) | M.Sen201186ORF1532P | |
1534 | bacteriophage protein | |||
1549 | bacteriophage protein | |||
1539 | M | M.StyTORF1914P (100% identity) | M.Sen201186ORF1539P | |
4386 | bacteriophage protein | |||
2743 | DMT superfamily transporter inner membrane | |||
2747 | V | V.StyTDcmP (100% identity) | V.Sen201186DcmP | |
2745 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen201186DcmP |
2751 | 231 aa hypothetical protein | |||
708 | Fis DNA-binding protein | |||
712 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen201186ORF712P |
742 | 54 aa hypothetical protein | |||
3638 | 75 aa hypothetical protein | |||
3766 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen201186ORF3766P |
3768 | endonuclease | |||
5364 | cell division protein DamX | |||
5366 | M | DNA adenine methylase | GATC | M.Sen201186DamP |
5365 | ribulose-phosphate 3-epimerase | |||
5779 | bacteriophage replication protein A | |||
5778 | M | M.StyTORF4329P (100% identity) | M.Sen201186ORF5778P | |
5780 | exonuclease | |||
plasmid pHCM1 | ||||
6187 | 385 aa hypothetical protein | |||
6185 | M | M.Ype21801ORF197P (100% identity) | M.Sen201186ORF6185P | |
6174 | 273 aa hypothetical protein | |||
6301 | 439 aa hypothetical protein | |||
6297 | M | M.StypAKU1ORFCP (100% identity) | M.Sen201186ORF6297P | |
6306 | nuclease | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
802 | metabolite transport protein | |||
834 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen201186ORF834P |
??? | R | StyTORF2507P (100% identity) | CAGAG | Sen201186ORF834P |
835 | terminal oxidase subunit I | |||
2759 | 462 aa hypothetical protein | |||
2762 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen201186ORF2762P | |
693 | R | StyTORF872P (100% identity) | Sen201186ORF2762P | |
2764 | PilV-like protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6067 | subunit R of type I restriction-modification | |||
6065 | R | StyTMrrP (100% identity) | Sen201186MrrP | |
6063 | 95 aa hypothetical protein |