Salmonella enterica subsp. enterica serovar Typhi 343078_223175 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi 343078_223175 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
| Sequence length: | GenBank #: | |
| Chromosome: | 4,782,707 bp | CP029964 |
| plasmid pK91: | 91,848 bp | CP029965 |
REBASE acronym: Sen223175
Org_num: 31673
All begin SM223175_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5968 | endoribonuclease SymE | |||
| 5969 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen223175ORF5969P |
| ??? | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen223175ORF5969P |
| 5971 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen223175ORF5969P |
| 5973 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1430 | bacteriophage protein | |||
| 1432 | M | M.StyTORF1926P (100% identity) | M.Sen223175ORF1432P | |
| 1439 | bacteriophage protein | |||
| 1434 | bacteriophage protein | |||
| 1448 | M | M.StyTORF1914P (100% identity) | M.Sen223175ORF1448P | |
| 1445 | bacteriophage protein | |||
| 2633 | DMT superfamily transporter inner membrane | |||
| 2637 | V | V.StyTDcmP (100% identity) | V.Sen223175DcmP | |
| 2634 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen223175DcmP |
| 2635 | 231 aa hypothetical protein | |||
| 4255 | Fis DNA-binding protein | |||
| 4257 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen223175ORF4257P |
| 4252 | 54 aa hypothetical protein | |||
| 4340 | 75 aa hypothetical protein | |||
| 4341 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen223175ORF4341P |
| 4342 | endonuclease | |||
| 5268 | cell division protein DamX | |||
| 5271 | M | DNA adenine methylase | GATC | M.Sen223175DamP |
| 5272 | ribulose-phosphate 3-epimerase | |||
| 5684 | bacteriophage replication protein A | |||
| 5685 | M | M.StyTORF4329P (100% identity) | M.Sen223175ORF5685P | |
| 5686 | exonuclease | |||
| plasmid pK91 | ||||
| 6968 | 885 aa hypothetical protein | |||
| 6965 | RM | SenPK1ORF23900P (100% identity) | ATGAAG | Sen223175ORF6965P |
| 6961 | 587 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4515 | metabolite transport protein | |||
| 692 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen223175ORF692P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen223175ORF692P |
| 697 | terminal oxidase subunit I | |||
| 2641 | 462 aa hypothetical protein | |||
| 2649 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen223175ORF2649P | |
| 2648 | R | StyTORF872P (100% identity) | Sen223175ORF2649P | |
| 2650 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5971 | subunit R of type I restriction-modification | |||
| 5973 | R | StyTMrrP (100% identity) | Sen223175MrrP | |
| 5972 | 95 aa hypothetical protein | |||