Salmonella enterica subsp. enterica serovar Typhi 343078_201101 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 343078_201101 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Complete sequence: 4,782,235 bp
GenBank #: CP029852
REBASE acronym: Sen201101
Org_num: 31670
All begin SM201101_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5977 | endoribonuclease SymE | |||
| 5976 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen201101ORF5976P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen201101ORF5976P |
| 5983 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen201101ORF5976P |
| 5979 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1416 | bacteriophage protein | |||
| 1419 | M | M.StyTORF1926P (100% identity) | M.Sen201101ORF1419P | |
| 1427 | bacteriophage protein | |||
| 1430 | bacteriophage protein | |||
| 1422 | M | M.StyTORF1914P (100% identity) | M.Sen201101ORF1422P | |
| 1433 | bacteriophage protein | |||
| 2599 | DMT superfamily transporter inner membrane | |||
| 399 | V | V.StyTDcmP (100% identity) | V.Sen201101DcmP | |
| 416 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen201101DcmP |
| 2602 | 231 aa hypothetical protein | |||
| 4568 | Fis DNA-binding protein | |||
| 4182 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen201101ORF4182P |
| 4188 | 54 aa hypothetical protein | |||
| 426 | 75 aa hypothetical protein | |||
| 504 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen201101ORF504P |
| 532 | endonuclease | |||
| 5285 | cell division protein DamX | |||
| 5286 | M | DNA adenine methylase | GATC | M.Sen201101DamP |
| 5279 | ribulose-phosphate 3-epimerase | |||
| 5687 | bacteriophage replication protein A | |||
| 5696 | M | M.StyTORF4329P (100% identity) | M.Sen201101ORF5696P | |
| 5697 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 716 | metabolite transport protein | |||
| 718 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen201101ORF718P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen201101ORF718P |
| 721 | terminal oxidase subunit I | |||
| 2589 | 462 aa hypothetical protein | |||
| 2612 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen201101ORF2612P | |
| 2615 | R | StyTORF872P (100% identity) | Sen201101ORF2612P | |
| 2617 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5983 | subunit R of type I restriction-modification | |||
| 5979 | R | StyTMrrP (100% identity) | Sen201101MrrP | |
| 5982 | 95 aa hypothetical protein | |||