Salmonella enterica subsp. enterica serovar Typhi 343077_228157 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi 343077_228157 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
| Sequence length: | GenBank #: | |
| Chromosome: | 4,807,408 bp | CP029864 |
| plasmid pHCM2: | 106,706 bp | CP029865 |
REBASE acronym: Sen228157
Org_num: 31652
All begin SM228157_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6041 | endoribonuclease SymE | |||
| 6042 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen228157ORF6042P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen228157ORF6042P |
| 6045 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen228157ORF6042P |
| 6036 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1411 | bacteriophage protein | |||
| 1415 | M | M.StyTORF1926P (100% identity) | M.Sen228157ORF1415P | |
| 1413 | bacteriophage protein | |||
| 1420 | bacteriophage protein | |||
| 1427 | M | M.StyTORF1914P (100% identity) | M.Sen228157ORF1427P | |
| 1414 | bacteriophage protein | |||
| 2601 | DMT superfamily transporter inner membrane | |||
| 2606 | V | V.StyTDcmP (100% identity) | V.Sen228157DcmP | |
| 2599 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen228157DcmP |
| 2607 | 231 aa hypothetical protein | |||
| 4193 | Fis DNA-binding protein | |||
| 4555 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen228157ORF4555P |
| 4191 | 54 aa hypothetical protein | |||
| 577 | 75 aa hypothetical protein | |||
| 615 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen228157ORF615P |
| 667 | endonuclease | |||
| 5344 | cell division protein DamX | |||
| 5341 | M | DNA adenine methylase | GATC | M.Sen228157DamP |
| 5343 | ribulose-phosphate 3-epimerase | |||
| 5755 | bacteriophage replication protein A | |||
| 5753 | M | M.StyTORF4329P (100% identity) | M.Sen228157ORF5753P | |
| 5757 | exonuclease | |||
| plasmid pHCM2 | ||||
| 7165 | 76 aa hypothetical protein | |||
| 6195 | M | M.StyCORF112P (100% identity) | M.Sen228157ORF6195P | |
| 7187 | 158 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 726 | metabolite transport protein | |||
| 724 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen228157ORF724P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen228157ORF724P |
| 730 | terminal oxidase subunit I | |||
| 2608 | 462 aa hypothetical protein | |||
| 2615 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen228157ORF2615P | |
| 2616 | R | StyTORF872P (100% identity) | Sen228157ORF2615P | |
| 2617 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6045 | subunit R of type I restriction-modification | |||
| 6036 | R | StyTMrrP (100% identity) | Sen228157MrrP | |
| 6046 | 95 aa hypothetical protein | |||