Salmonella enterica subsp. enterica serovar Typhi 343077_228140 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 343077_228140 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
| Sequence length: | GenBank #: | |
| Chromosome: | 4,790,593 bp | CP029866 |
| plasmid pHCM2: | 106,706 bp | CP029867 |
REBASE acronym: Sen228140
Org_num: 31651
All begin SA228140_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5924 | endoribonuclease SymE | |||
| 5925 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen228140ORF5925P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen228140ORF5925P |
| 5927 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen228140ORF5925P |
| 5928 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1401 | bacteriophage protein | |||
| 1402 | M | M.StyTORF1926P (100% identity) | M.Sen228140ORF1402P | |
| 1403 | bacteriophage protein | |||
| 4365 | bacteriophage protein | |||
| 1395 | M | M.StyTORF1914P (100% identity) | M.Sen228140ORF1395P | |
| 1413 | bacteriophage protein | |||
| 2570 | DMT superfamily transporter inner membrane | |||
| 2569 | V | V.StyTDcmP (100% identity) | V.Sen228140DcmP | |
| 2573 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen228140DcmP |
| 2571 | 231 aa hypothetical protein | |||
| 4140 | Fis DNA-binding protein | |||
| 3589 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen228140ORF3589P |
| 4147 | 54 aa hypothetical protein | |||
| 161 | 75 aa hypothetical protein | |||
| 165 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen228140ORF165P |
| 4305 | endonuclease | |||
| 5235 | cell division protein DamX | |||
| 5238 | M | DNA adenine methylase | GATC | M.Sen228140DamP |
| 5228 | ribulose-phosphate 3-epimerase | |||
| 6968 | replication endonuclease | |||
| 5642 | M | M.StyTORF4329P (100% identity) | M.Sen228140ORF5642P | |
| 5645 | exonuclease | |||
| plasmid pHCM2 | ||||
| 6010 | 308 aa hypothetical protein | |||
| 6013 | M | M.StyCORF112P (100% identity) | M.Sen228140ORF6013P | |
| 7054 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 676 | metabolite transport protein | |||
| 684 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen228140ORF684P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen228140ORF684P |
| 4354 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5927 | subunit R of type I restriction-modification | |||
| 5928 | R | StyTMrrP (100% identity) | Sen228140MrrP | |
| 5931 | 95 aa hypothetical protein | |||