Salmonella enterica subsp. enterica serovar Typhi 343077_212159 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 343077_212159 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Complete sequence: 4,795,465 bp
GenBank #: CP029870
REBASE acronym: Sen212159
Org_num: 31646
All begin SM212159_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5872 | endoribonuclease SymE | |||
| 5874 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen212159ORF5874P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen212159ORF5874P |
| 5876 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen212159ORF5874P |
| 5879 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1330 | bacteriophage protein | |||
| 1328 | M | M.StyTORF1926P (100% identity) | M.Sen212159ORF1328P | |
| 1331 | bacteriophage protein | |||
| 4317 | bacteriophage protein | |||
| 1341 | M | M.StyTORF1914P (100% identity) | M.Sen212159ORF1341P | |
| 1345 | bacteriophage protein | |||
| 2538 | DMT superfamily transporter inner membrane | |||
| 2537 | V | V.StyTDcmP (100% identity) | V.Sen212159DcmP | |
| 2535 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen212159DcmP |
| 2540 | 231 aa hypothetical protein | |||
| 4120 | Fis DNA-binding protein | |||
| 4116 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen212159ORF4116P |
| 4117 | 54 aa hypothetical protein | |||
| 4227 | 75 aa hypothetical protein | |||
| 4229 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen212159ORF4229P |
| 4231 | endonuclease | |||
| 5180 | cell division protein DamX | |||
| 5184 | M | DNA adenine methylase | GATC | M.Sen212159DamP |
| 5185 | ribulose-phosphate 3-epimerase | |||
| 6901 | replication endonuclease | |||
| 5594 | M | M.StyTORF4329P (100% identity) | M.Sen212159ORF5594P | |
| 5592 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 613 | metabolite transport protein | |||
| 616 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen212159ORF616P |
| ??? | R | SenCEPR1ORF17065P (99% identity) | CAGAG | Sen212159ORF616P |
| 620 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5876 | subunit R of type I restriction-modification | |||
| 5879 | R | StyTMrrP (100% identity) | Sen212159MrrP | |
| 5880 | 95 aa hypothetical protein | |||