Salmonella enterica subsp. enterica serovar Typhi 343077_212138 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 343077_212138 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Complete sequence: 4,774,558 bp
GenBank #: CP029919
REBASE acronym: Sen212138
Org_num: 31645
All begin SM212138_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5904 | endoribonuclease SymE | |||
| 5907 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen212138ORF5907P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen212138ORF5907P |
| 5909 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen212138ORF5907P |
| 5913 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1393 | bacteriophage protein | |||
| 1392 | M | M.StyTORF1926P (100% identity) | M.Sen212138ORF1392P | |
| 4346 | bacteriophage protein | |||
| 1403 | bacteriophage protein | |||
| 1398 | M | M.StyTORF1914P (100% identity) | M.Sen212138ORF1398P | |
| 1405 | bacteriophage protein | |||
| 4435 | DMT superfamily transporter inner membrane | |||
| 2551 | V | V.StyTDcmP (100% identity) | V.Sen212138DcmP | |
| 2555 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen212138DcmP |
| 2545 | 231 aa hypothetical protein | |||
| 4120 | Fis DNA-binding protein | |||
| 4119 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen212138ORF4119P |
| 4124 | 54 aa hypothetical protein | |||
| 219 | 75 aa hypothetical protein | |||
| 226 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen212138ORF226P |
| 221 | endonuclease | |||
| 5232 | cell division protein DamX | |||
| 5236 | M | DNA adenine methylase | GATC | M.Sen212138DamP |
| 5233 | ribulose-phosphate 3-epimerase | |||
| 6855 | replication endonuclease | |||
| 5638 | M | M.StyTORF4329P (100% identity) | M.Sen212138ORF5638P | |
| 5641 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 712 | metabolite transport protein | |||
| 707 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen212138ORF707P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen212138ORF707P |
| 716 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5909 | subunit R of type I restriction-modification | |||
| 5913 | R | StyTMrrP (100% identity) | Sen212138MrrP | |
| 5912 | 95 aa hypothetical protein | |||