Salmonella enterica subsp. enterica serovar Typhi 343076_252143 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi 343076_252143 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
| Sequence length: | GenBank #: | |
| Chromosome: | 4,808,285 bp | CP029892 |
| plasmid pHCM2: | 106,706 bp | CP029893 |
REBASE acronym: Sen252143
Org_num: 31640
All begin SM252143_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4712 | endoribonuclease SymE | |||
| 4708 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen252143ORF4708P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen252143ORF4708P |
| 4714 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen252143ORF4708P |
| 4715 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1423 | bacteriophage protein | |||
| 1417 | M | M.StyTORF1926P (100% identity) | M.Sen252143ORF1417P | |
| 1416 | bacteriophage protein | |||
| 1433 | bacteriophage protein | |||
| 1430 | M | M.StyTORF1914P (100% identity) | M.Sen252143ORF1430P | |
| 1437 | bacteriophage protein | |||
| 5977 | DMT superfamily transporter inner membrane | |||
| 2601 | V | V.StyTDcmP (100% identity) | V.Sen252143DcmP | |
| 2607 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen252143DcmP |
| 2611 | 231 aa hypothetical protein | |||
| 4162 | Fis DNA-binding protein | |||
| 4165 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen252143ORF4165P |
| 4161 | 54 aa hypothetical protein | |||
| 812 | 75 aa hypothetical protein | |||
| 945 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen252143ORF945P |
| 937 | endonuclease | |||
| 5557 | cell division protein DamX | |||
| 5559 | M | M.StyTDamP (100% identity) | GATC | M.Sen252143DamP |
| 5560 | ribulose-phosphate 3-epimerase | |||
| 4427 | bacteriophage replication protein A | |||
| 4429 | M | M.StyTORF4329P (100% identity) | M.Sen252143ORF4429P | |
| 4432 | exonuclease | |||
| plasmid pHCM2 | ||||
| 7144 | 76 aa hypothetical protein | |||
| 6168 | M | M.StyCORF112P (100% identity) | M.Sen252143ORF6168P | |
| 6169 | 308 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 693 | metabolite transport protein | |||
| 696 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen252143ORF696P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen252143ORF696P |
| 698 | terminal oxidase subunit I | |||
| 2619 | 462 aa hypothetical protein | |||
| 2620 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen252143ORF2620P | |
| 2608 | R | StyTORF872P (100% identity) | Sen252143ORF2620P | |
| 2621 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4714 | subunit R of type I restriction-modification | |||
| 4715 | R | StyTMrrP (100% identity) | Sen252143MrrP | |
| 4718 | 95 aa hypothetical protein | |||