Salmonella enterica subsp. enterica serovar Typhi 343076_248190 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 343076_248190 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Complete sequence: 4,773,823 bp
GenBank #: CP029882
REBASE acronym: Sen248190
Org_num: 31638
All begin SM248190_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5901 | endoribonuclease SymE | |||
| 5903 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen248190ORF5903P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen248190ORF5903P |
| 5905 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen248190ORF5903P |
| 5904 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1429 | bacteriophage protein | |||
| 1423 | M | M.StyTORF1926P (100% identity) | M.Sen248190ORF1423P | |
| 1430 | bacteriophage protein | |||
| 1427 | bacteriophage protein | |||
| 1439 | M | M.StyTORF1914P (100% identity) | M.Sen248190ORF1439P | |
| 1437 | bacteriophage protein | |||
| 2574 | DMT superfamily transporter inner membrane | |||
| 452 | V | V.StyTDcmP (100% identity) | V.Sen248190DcmP | |
| 2582 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen248190DcmP |
| 4412 | 231 aa hypothetical protein | |||
| 4149 | Fis DNA-binding protein | |||
| 4150 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen248190ORF4150P |
| 4145 | 54 aa hypothetical protein | |||
| 329 | 75 aa hypothetical protein | |||
| 334 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen248190ORF334P |
| 4264 | endonuclease | |||
| 5225 | cell division protein DamX | |||
| 5226 | M | M.StyTDamP (100% identity) | GATC | M.Sen248190DamP |
| 5228 | ribulose-phosphate 3-epimerase | |||
| 6847 | replication endonuclease | |||
| 5636 | M | M.StyTORF4329P (100% identity) | M.Sen248190ORF5636P | |
| 5637 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 720 | metabolite transport protein | |||
| 727 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen248190ORF727P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen248190ORF727P |
| 730 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5905 | subunit R of type I restriction-modification | |||
| 5904 | R | StyTMrrP (100% identity) | Sen248190MrrP | |
| 5907 | 95 aa hypothetical protein | |||