Salmonella enterica subsp. enterica serovar Typhi 311189_239103 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 311189_239103 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Complete sequence: 4,778,864 bp
GenBank #: CP029908
REBASE acronym: Sen239103
Org_num: 31624
All begin SM239103_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6421 | hypothetical protein | |||
| 6419 | M | M.SenTS7ORF21290P (100% identity) | M.Sen239103ORF6419P | |
| 6814 | S | S.SenTS7ORF21290P (100% identity) | S.Sen239103ORF6419P | |
| 6818 | hypothetical protein | |||
| 6817 | hypothetical protein | |||
| 6819 | hypothetical protein | |||
| 6821 | R | SenTS7ORF21290P (100% identity) | Sen239103ORF6419P | |
| 6820 | hypothetical protein | |||
| 5916 | endoribonuclease SymE | |||
| 5919 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen239103ORF5919P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen239103ORF5919P |
| 5920 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen239103ORF5919P |
| 5922 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1423 | bacteriophage protein | |||
| 1424 | M | M.StyTORF1926P (100% identity) | M.Sen239103ORF1424P | |
| 1425 | bacteriophage protein | |||
| 1431 | bacteriophage protein | |||
| 1432 | M | M.StyTORF1914P (100% identity) | M.Sen239103ORF1432P | |
| 1435 | bacteriophage protein | |||
| 2584 | DMT superfamily transporter inner membrane | |||
| 4422 | V | V.StyTDcmP (100% identity) | V.Sen239103DcmP | |
| 2589 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen239103DcmP |
| 370 | 231 aa hypothetical protein | |||
| 4164 | Fis DNA-binding protein | |||
| 4162 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen239103ORF4162P |
| 4165 | 54 aa hypothetical protein | |||
| 300 | 75 aa hypothetical protein | |||
| 303 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen239103ORF303P |
| 304 | endonuclease | |||
| 5230 | cell division protein DamX | |||
| 5231 | M | DNA adenine methylase | GATC | M.Sen239103DamP |
| 5232 | ribulose-phosphate 3-epimerase | |||
| 6862 | replication endonuclease | |||
| 5632 | M | M.StyTORF4329P (100% identity) | M.Sen239103ORF5632P | |
| 5634 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 726 | metabolite transport protein | |||
| 729 | M | M.Sen232103ORF699P (100% identity) | CAGAG | M.Sen239103ORF729P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen239103ORF729P |
| 728 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5920 | subunit R of type I restriction-modification | |||
| 5922 | R | StyTMrrP (100% identity) | Sen239103MrrP | |
| 5923 | 95 aa hypothetical protein | |||