|
Putative Salmonella enterica subsp. enterica serovar Typhi 311189_220186 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Sequence length: | GenBank #: | |
Chromosome: | 4,783,528 bp | CP029886 |
plasmid pHCM1: | 216,908 bp | CP029887 |
REBASE acronym: Sen220186
Org_num: 31617
All begin SM220186_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5979 | endoribonuclease SymE | |||
5980 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen220186ORF5980P |
??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen220186ORF5980P |
5981 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen220186ORF5980P |
5982 | mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4543 | bacteriophage protein | |||
1441 | M | M.StyTORF1926P (100% identity) | M.Sen220186ORF1441P | |
1446 | bacteriophage protein | |||
1451 | bacteriophage protein | |||
4546 | M | M.StyTORF1914P (100% identity) | M.Sen220186ORF4546P | |
4468 | bacteriophage protein | |||
2645 | DMT superfamily transporter inner membrane | |||
2653 | V | V.StyTDcmP (100% identity) | V.Sen220186DcmP | |
306 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen220186DcmP |
2655 | 231 aa hypothetical protein | |||
4268 | Fis DNA-binding protein | |||
4266 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen220186ORF4266P |
4269 | 54 aa hypothetical protein | |||
4356 | 75 aa hypothetical protein | |||
4348 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen220186ORF4348P |
4359 | endonuclease | |||
5281 | cell division protein DamX | |||
5282 | M | DNA adenine methylase | GATC | M.Sen220186DamP |
5283 | ribulose-phosphate 3-epimerase | |||
5689 | bacteriophage replication protein A | |||
5694 | M | M.StyTORF4329P (100% identity) | M.Sen220186ORF5694P | |
5695 | exonuclease | |||
plasmid pHCM1 | ||||
7105 | 385 aa hypothetical protein | |||
7081 | M | M.Ype21801ORF197P (100% identity) | M.Sen220186ORF7081P | |
7108 | 273 aa hypothetical protein | |||
7222 | 439 aa hypothetical protein | |||
7219 | M | M.StypAKU1ORFCP (100% identity) | M.Sen220186ORF7219P | |
7207 | nuclease | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
697 | metabolite transport protein | |||
694 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen220186ORF694P |
??? | R | StyTORF2507P (100% identity) | CAGAG | Sen220186ORF694P |
699 | terminal oxidase subunit I | |||
2667 | 462 aa hypothetical protein | |||
2665 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen220186ORF2665P | |
2666 | R | StyTORF872P (100% identity) | Sen220186ORF2665P | |
2669 | PilV-like protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5981 | subunit R of type I restriction-modification | |||
5982 | R | StyTMrrP (100% identity) | Sen220186MrrP | |
5983 | 95 aa hypothetical protein |