Salmonella enterica subsp. enterica serovar Typhi 311189_215186 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi 311189_215186 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
| Sequence length: | GenBank #: | |
| Chromosome: | 4,782,608 bp | CP029930 |
| plasmid pHCM1: | 216,915 bp | CP029931 |
REBASE acronym: Sen215186
Org_num: 31613
All begin SM215186_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6065 | endoribonuclease SymE | |||
| 6068 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen215186ORF6068P |
| ??? | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen215186ORF6068P |
| 6062 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen215186ORF6068P |
| 6064 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1496 | bacteriophage protein | |||
| 1499 | M | M.StyTORF1926P (100% identity) | M.Sen215186ORF1499P | |
| 1498 | bacteriophage protein | |||
| 1508 | bacteriophage protein | |||
| 213 | M | M.StyTORF1914P (100% identity) | M.Sen215186ORF213P | |
| 1514 | bacteriophage protein | |||
| 2656 | DMT superfamily transporter inner membrane | |||
| 2661 | V | V.StyTDcmP (100% identity) | V.Sen215186DcmP | |
| 489 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen215186DcmP |
| 2664 | 231 aa hypothetical protein | |||
| 4258 | Fis DNA-binding protein | |||
| 4253 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen215186ORF4253P |
| 4257 | 54 aa hypothetical protein | |||
| 426 | 75 aa hypothetical protein | |||
| 451 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen215186ORF451P |
| 433 | endonuclease | |||
| 5370 | cell division protein DamX | |||
| 5368 | M | DNA adenine methylase | GATC | M.Sen215186DamP |
| 5369 | ribulose-phosphate 3-epimerase | |||
| 5781 | bacteriophage replication protein A | |||
| 5778 | M | M.StyTORF4329P (100% identity) | M.Sen215186ORF5778P | |
| 5784 | exonuclease | |||
| plasmid pHCM1 | ||||
| 6188 | 385 aa hypothetical protein | |||
| 6190 | M | M.Ype21801ORF197P (100% identity) | M.Sen215186ORF6190P | |
| 6191 | 273 aa hypothetical protein | |||
| 6304 | 439 aa hypothetical protein | |||
| 6310 | M | M.StypAKU1ORFCP (100% identity) | M.Sen215186ORF6310P | |
| 6302 | nuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 786 | metabolite transport protein | |||
| 789 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen215186ORF789P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen215186ORF789P |
| 788 | terminal oxidase subunit I | |||
| 2675 | 462 aa hypothetical protein | |||
| 2668 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen215186ORF2668P | |
| 2676 | R | StyTORF872P (100% identity) | Sen215186ORF2668P | |
| 2674 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6062 | subunit R of type I restriction-modification | |||
| 6064 | R | StyTMrrP (100% identity) | Sen215186MrrP | |
| 6070 | 95 aa hypothetical protein | |||