|
Putative Salmonella enterica subsp. enterica serovar Typhi 311189_213186 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Sequence length: | GenBank #: | |
Chromosome: | 4,783,243 bp | CP029936 |
plasmid pHCM1: | 216,699 bp | CP029935 |
REBASE acronym: Sen213186
Org_num: 31611
All begin SM213186_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5975 | endoribonuclease SymE | |||
5974 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen213186ORF5974P |
??? | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen213186ORF5974P |
5976 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen213186ORF5974P |
5979 | mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1457 | bacteriophage protein | |||
1462 | M | M.StyTORF1926P (100% identity) | M.Sen213186ORF1462P | |
105 | bacteriophage protein | |||
1474 | bacteriophage protein | |||
1472 | M | M.StyTORF1914P (100% identity) | M.Sen213186ORF1472P | |
1475 | bacteriophage protein | |||
2672 | DMT superfamily transporter inner membrane | |||
2676 | V | V.StyTDcmP (100% identity) | V.Sen213186DcmP | |
2667 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen213186DcmP |
2678 | 231 aa hypothetical protein | |||
4303 | Fis DNA-binding protein | |||
1108 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen213186ORF1108P |
1045 | 54 aa hypothetical protein | |||
4055 | 75 aa hypothetical protein | |||
4127 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen213186ORF4127P |
4114 | endonuclease | |||
5278 | cell division protein DamX | |||
5279 | M | DNA adenine methylase | GATC | M.Sen213186DamP |
5280 | ribulose-phosphate 3-epimerase | |||
5690 | bacteriophage replication protein A | |||
5692 | M | M.StyTORF4329P (100% identity) | M.Sen213186ORF5692P | |
5691 | exonuclease | |||
plasmid pHCM1 | ||||
7106 | 385 aa hypothetical protein | |||
7105 | M | M.Ype21801ORF197P (100% identity) | M.Sen213186ORF7105P | |
7100 | 273 aa hypothetical protein | |||
7215 | 439 aa hypothetical protein | |||
7216 | M | M.StypAKU1ORFCP (100% identity) | M.Sen213186ORF7216P | |
7223 | nuclease | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
742 | metabolite transport protein | |||
748 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen213186ORF748P |
??? | R | StyTORF2507P (100% identity) | CAGAG | Sen213186ORF748P |
744 | terminal oxidase subunit I | |||
2689 | 462 aa hypothetical protein | |||
2688 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen213186ORF2688P | |
2685 | R | StyTORF872P (100% identity) | Sen213186ORF2688P | |
2690 | PilV-like protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5976 | subunit R of type I restriction-modification | |||
5979 | R | StyTMrrP (100% identity) | Sen213186MrrP | |
5978 | 95 aa hypothetical protein |