Salmonella enterica subsp. enterica serovar Typhi 311189_203186 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 311189_203186 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
| Sequence length: | GenBank #: | |
| Chromosome: | 4,786,232 bp | CP029942 |
| plasmid pHCM1: | 217,175 bp | CP029941 |
REBASE acronym: Sen2031186
Org_num: 31600
All begin SM203186_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5963 | endoribonuclease SymE | |||
| 5974 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen2031186ORF5974P |
| ??? | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen2031186ORF5974P |
| 5961 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen2031186ORF5974P |
| 5975 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1464 | bacteriophage protein | |||
| 1467 | M | M.StyTORF1926P (100% identity) | M.Sen2031186ORF1467P | |
| 1469 | bacteriophage protein | |||
| 1476 | bacteriophage protein | |||
| 1477 | M | M.StyTORF1914P (100% identity) | M.Sen2031186ORF1477P | |
| 108 | bacteriophage protein | |||
| 2640 | DMT superfamily transporter inner membrane | |||
| 2658 | V | V.StyTDcmP (100% identity) | V.Sen2031186DcmP | |
| 2656 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen2031186DcmP |
| 2648 | 231 aa hypothetical protein | |||
| 844 | Fis DNA-binding protein | |||
| 857 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen2031186ORF857P |
| 927 | 54 aa hypothetical protein | |||
| 3900 | 75 aa hypothetical protein | |||
| 3940 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen2031186ORF3940P |
| 3950 | endonuclease | |||
| 5286 | cell division protein DamX | |||
| 5281 | M | DNA adenine methylase | GATC | M.Sen2031186DamP |
| 5287 | ribulose-phosphate 3-epimerase | |||
| 5688 | bacteriophage replication protein A | |||
| 5685 | M | M.StyTORF4329P (100% identity) | M.Sen2031186ORF5685P | |
| 5683 | exonuclease | |||
| plasmid pHCM1 | ||||
| 7102 | 385 aa hypothetical protein | |||
| 7101 | M | M.Ype21801ORF197P (100% identity) | M.Sen2031186ORF7101P | |
| 7088 | 273 aa hypothetical protein | |||
| 7215 | 439 aa hypothetical protein | |||
| 7185 | M | M.StypAKU1ORFCP (100% identity) | M.Sen2031186ORF7185P | |
| 7221 | nuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 712 | metabolite transport protein | |||
| 717 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen2031186ORF717P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen2031186ORF717P |
| 716 | terminal oxidase subunit I | |||
| 4352 | 462 aa hypothetical protein | |||
| 2668 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen2031186ORF2668P | |
| 2673 | R | StyTORF872P (100% identity) | Sen2031186ORF2668P | |
| 2669 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5961 | subunit R of type I restriction-modification | |||
| 5975 | R | StyTMrrP (100% identity) | Sen2031186MrrP | |
| 5976 | 95 aa hypothetical protein | |||