Helicobacter pylori Hp_TH2099 |
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Putative Helicobacter pylori Hp_TH2099 RM systems
Ref: Hashi,K. unpublished
REBASE ref # 27675
Complete sequence: 1,667,396 bp
GenBank #: CP025748
REBASE acronym: Hpy2099
Org_num: 31574
All begin C1I82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2280 | 0 aa hypothetical protein | |||
| 2285 | S | S.HpyU422ORF2100P (57% identity) | S.Hpy2099ORF2290P | |
| 2290 | M | M.HpyKH22ORFEP (95% identity) | M.Hpy2099ORF2290P | |
| 2295 | R | Hpy274ORF526P (85% identity) | Hpy2099ORF2290P | |
| 2300 | DUF115 domain-containing protein | |||
| 4175 | hydroxyethylthiazole kinase | |||
| 4180 | R | HpyNP03ORF2285P (95% identity) | Hpy2099ORF4200P | |
| 4185 | restriction endonuclease subunit S | |||
| 4190 | S | restriction endonuclease subunit S | S.Hpy2099ORF4200P | |
| 4195 | type I restriction endonuclease | |||
| 4200 | M | M.HpyMM11ORF4090P (94% identity) | M.Hpy2099ORF4200P | |
| 4205 | type I restriction endonuclease | |||
| 6980 | metal-dependent hydrolase | |||
| 6985 | R | HpyMA16XIIP (95% identity) | Hpy2099ORF6990P | |
| 6990 | M | M.HpyKH32ORFKP (96% identity) | M.Hpy2099ORF6990P | |
| 6995 | S | S.HpySP05X (23% identity) | S.Hpy2099ORF6990P | |
| 7000 | CAAX protease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 260 | agmatine deiminase | |||
| 265 | M | M1.HpyCOL105IV (97% identity) | CCTC | M1.Hpy2099ORF265P |
| 270 | M | M2.HpyT026ORF340P (22% identity) | M2.Hpy2099ORF265P | |
| 475 | [acyl-carrier-protein] S-malonyltransferase | |||
| 485 | R | HpyFD430ORFA1P (97% identity) | GATC | Hpy2099ORF490P |
| 490 | M | M.HpyNAB47ORFH1P (97% identity) | GATC | M.Hpy2099ORF490P |
| 495 | alpha-1,2-fucosyltransferase | |||
| 1335 | exodeoxyribonuclease VII large subunit | |||
| 1340 | M | M.HpyKH40ORFAP (80% identity) | M.Hpy2099ORF1340P | |
| 1345 | endonuclease | |||
| 1340 | site-specific DNA-methyltransferase | |||
| 1345 | R | HpyFD703ORF1420P (93% identity) | CCGG | Hpy2099ORF1350P |
| 1350 | M | M.HpyGU83AORFAP (96% identity) | CCGG | M.Hpy2099ORF1350P |
| 1355 | ATP-dependent chaperone ClpB | |||
| 1835 | Laminin subunit alpha-2 precursor | |||
| 1840 | R | HpyMM04XIIP (99% identity) | TCNNGA | Hpy2099ORF1845P |
| 1845 | M | M.HpyS299ORF4305P (97% identity) | M.Hpy2099ORF1845P | |
| 1850 | acetyl-CoA carboxylase biotin carboxylase | |||
| 2365 | 367 aa hypothetical protein | |||
| 2370 | M | M.HpyMM07II (98% identity) | ATTAAT | M.Hpy2099ORF2370P |
| 2375 | glycosyltransferase 9 family protein | |||
| 2380 | translational GTPase TypA | |||
| 2385 | M | M.HpyMA17VIII (98% identity) | ACNGT | M.Hpy2099ORF2385P |
| 2390 | R | Hpyfe57ORF4905P (98% identity) | ACNGT | Hpy2099ORF2385P |
| 2395 | DNA (cytosine-5-)-methyltransferase | |||
| 2390 | restriction endonuclease | |||
| 2395 | M | M.HpyMA25ORF2375P (98% identity) | ACGT | M.Hpy2099ORF2395P |
| 2400 | R | HpyNP01ORF2410P (96% identity) | ACGT | Hpy2099ORF2395P |
| 2405 | catalase | |||
| 2500 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 2505 | R | HpyBG3XIP (79% identity) | Hpy2099ORF2505P | |
| 2510 | endopeptidase | |||
| 4485 | flagellar hook protein FlgE | |||
| 4490 | R | HpyNAB47ORFPP (98% identity) | GTNNAC | Hpy2099ORF4495P |
| 4495 | M | M.HpyUM084ORF7720P (97% identity) | GTNNAC | M.Hpy2099ORF4495P |
| 4500 | ATP-dependent DNA helicase | |||
| 5535 | 144 aa hypothetical protein | |||
| 5540 | M | M.HpyFD568ORFNP (97% identity) | M.Hpy2099ORF5540P | |
| 5545 | flagellar biosynthesis protein FlgM | |||
| 6005 | HAD family hydrolase | |||
| 6010 | M | M.HpyMM01I (96% identity) | CATG | M.Hpy2099ORF6010P |
| 6015 | R | HpyNAB47ORFMP (92% identity) | CATG | Hpy2099ORF6010P |
| 6020 | serine O-acetyltransferase | |||
| 6720 | peptidase S41 | |||
| ??? | R | HpyKH43ORFYP (96% identity) | GANTC | Hpy2099ORF6735P |
| 6735 | M | M.HpyMM01X (99% identity) | GANTC | M.Hpy2099ORF6735P |
| 6740 | DNA methyltransferase | |||
| 6800 | DNA-binding response regulator | |||
| 6805 | R | HpyFD423ORFK1P (98% identity) | GAAGA | Hpy2099ORF6810P |
| 6810 | M | M2.HpyBS06ORF810P (99% identity) | GAAGA | M1.Hpy2099ORF6810P |
| 6815 | M | M2.HpyUM111ORF1630P (99% identity) | GAAGA | M2.Hpy2099ORF6810P |
| 6820 | DNA-binding response regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6825 | restriction endonuclease subunit M | |||
| 6830 | M | site-specific DNA-methyltransferase | M.Hpy2099ORF6830P | |
| 6835 | R | HpyMA16ORF6805P (92% identity) | Hpy2099ORF6830P | |
| 6840 | rod shape-determining protein MreC | |||
| 7605 | hypothetical protein | |||
| 7610 | R | HpyKH44ORFQP (95% identity) | Hpy2099ORF7615P | |
| ??? | M | hypothetical protein | M.Hpy2099ORF7615P | |
| 7630 | ATP-dependent DNA helicase RecG | |||