|
Putative Escherichia coli ECCHD184 RM systems
Ref: Tang,B. et al. unpublished
REBASE ref # 27616
Sequence length: | GenBank #: | |
Chromosome: | 4,783,813 bp | CP033250 |
plasmid pTB211: | 164,062 bp | CP033251 |
plasmid pTB212: | 110,417 bp | CP033252 |
REBASE acronym: Eco184
Org_num: 31467
All begin D3W51_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
13830 | M48 family peptidase | |||
13835 | R | EcoE89ORF13420P (100% identity) | Eco184ORF13850P | |
13840 | YecA family protein | |||
13845 | S | S1.Elu333czORF5715P (97% identity) | S.Eco184ORF13850P | |
13850 | M | M.EcoPSJ23ORF17510P (100% identity) | M.Eco184ORF13850P | |
13855 | 388 aa hypothetical protein | |||
20415 | DUF262 domain-containing protein | |||
20420 | R | EcoPSJ12ORF22640P (100% identity) | Eco184ORF20425P | |
20425 | M | M.EcoPSJ12ORF22640P (98% identity) | M.Eco184ORF20425P | |
20430 | S | S.EcoYPE10ORF21230P (99% identity) | S.Eco184ORF20425P | |
20435 | endoribonuclease SymE | |||
plasmid pTB211 | ||||
24020 | 3-phosphatase | |||
24025 | R | EcoZ063ORF23860P (99% identity) | Eco184ORF24035P | |
24030 | S | S1.EcoP61ORF22960P (100% identity) | S.Eco184ORF24035P | |
24035 | M | M.EcosS142ORF43560P (100% identity) | M.Eco184ORF24035P | |
24040 | type II toxin-antitoxin system Phd/YefM family | |||
plasmid pTB212 | ||||
24925 | DUF4942 domain-containing protein | |||
24930 | M | M.EcoJEc21ORF23120P (99% identity) | M.Eco184ORF24930P | |
24935 | S | S.Eco45C23ORF13855P (65% identity) | S.Eco184ORF24930P | |
24940 | R | Eco16C11ORF28060P (99% identity) | Eco184ORF24930P | |
24945 | 158 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1645 | cell division protein DamX | |||
1650 | M | DNA adenine methylase | GATC | M.Eco184DamP |
1655 | ribulose-phosphate 3-epimerase | |||
2290 | DUF2556 domain-containing protein | |||
2295 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco184ORF2295P |
2300 | Fis family transcriptional regulator | |||
7745 | ATP-dependent helicase | |||
7750 | RM | SflFF59ORF15035P (100% identity) | Eco184ORF7750P | |
7755 | signal peptidase II | |||
14205 | drug/metabolite exporter YedA | |||
14210 | V | V.SsoST152DcmP (100% identity) | V.Eco184DcmP | |
14215 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco184DcmP |
14220 | phosphohydrolase | |||
15350 | replication endonuclease | |||
15355 | M | M.SflP099ORF15630P (100% identity) | GATC | M.Eco184ORF15355P |
15360 | TraR/DksA family transcriptional regulator | |||
15970 | NinE family protein | |||
15975 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco184ORF15975P |
15980 | recombination protein NinB | |||
18775 | LexA family transcriptional regulator | |||
18780 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco184ORF18780P |
18785 | PerC family transcriptional regulator | |||
plasmid pTB212 | ||||
24975 | 76 aa hypothetical protein | |||
24980 | M | M.SphSSU5ORF88P (96% identity) | M.Eco184ORF24980P | |
24985 | 318 aa hypothetical protein |