Citrobacter freundii UMH15 |
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Putative Citrobacter freundii UMH15 RM systems
Ref: Anderson,M.T. et al. Sci Rep 8 (1), 11792 (2018)
REBASE ref # 27586
Complete sequence: 5,343,952 bp
GenBank #: CP024679
REBASE acronym: CfrMH15
Org_num: 31404
All begin CUC47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18560 | 287 aa hypothetical protein | |||
| 18565 | M | M.Csp107ORF3022P (99% identity) | CNAGNNNNNNTAAC | M.CfrMH15II |
| 18570 | S | S.Csp107ORF3022P (100% identity) | CNAGNNNNNNTAAC | S.CfrMH15II |
| 18575 | anticodon nuclease | |||
| 18580 | R | Csp107ORF3022P (99% identity) | CNAGNNNNNNTAAC | CfrMH15IIP |
| 18585 | DUF262 domain-containing protein | |||
| 26310 | endoribonuclease SymE | |||
| 26315 | S | S.Cfr550ORF15875P (100% identity) | CACNNNNNNNRTANYC | S.CfrMH15I |
| 26320 | M | M.Cfr550ORF15875P (100% identity) | CACNNNNNNNRTANYC | M.CfrMH15I |
| 26325 | R | Cfr550ORF15875P (100% identity) | CACNNNNNNNRTANYC | CfrMH15IP |
| 26330 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6860 | HNH endonuclease | |||
| 6865 | M | M.EasIK3ORFJP (97% identity) | M.CfrMH15ORF6865P | |
| 6870 | conjugal transfer protein TraR | |||
| 6880 | 72 aa hypothetical protein | |||
| 6885 | M | M.Elu333czORF4565P (95% identity) | M.CfrMH15ORF6885P | |
| 6890 | 85 aa hypothetical protein | |||
| 11690 | drug/metabolite exporter YedA | |||
| 11695 | V | V.CfrLORF9975P (100% identity) | V.CfrMH15ORF11700P | |
| 11700 | M | M.Cfr830ORF8925P (100% identity) | M.CfrMH15ORF11700P | |
| 11705 | phosphohydrolase | |||
| 14680 | DUF1317 domain-containing protein | |||
| 14685 | M | M.EcoO127ORF2780P (98% identity) | M.CfrMH15ORF14685P | |
| 14690 | 59 aa hypothetical protein | |||
| 15720 | endonuclease | |||
| 15725 | M | M.EcoE7476ORFFP (100% identity) | M.CfrMH15ORF15725P | |
| 15730 | 75 aa hypothetical protein | |||
| 19700 | Fis family transcriptional regulator | |||
| 19705 | M | M.CspMGH103ORFEP (100% identity) | ATGCAT | M.CfrMH15III |
| 19710 | DUF2556 domain-containing protein | |||
| 20270 | ribulose-phosphate 3-epimerase | |||
| 20275 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrMH15DamP |
| 20280 | cell division protein DamX | |||
| 23940 | GntR family transcriptional regulator | |||
| 23945 | M | M2.Cpo64ACORF1855P (97% identity) | M.CfrMH15ORF23945P | |
| 23950 | DNA cytosine methyltransferase | |||
| 23945 | phage N-6-adenine-methyltransferase | |||
| 23950 | M | M1.Cpo64ACORF1855P (99% identity) | M.CfrMH15ORF23950P | |
| 23955 | 128 aa hypothetical protein | |||
| 24720 | conjugal transfer TraD family protein | |||
| 24725 | V | V.Mmo12289ORF1444P (100% identity) | V.CfrMH15ORF24730P | |
| 24730 | M | M.KquU41ORF24735P (100% identity) | GCGCGC | M.CfrMH15ORF24730P |
| 24735 | R | Mmo12289ORF1444P (100% identity) | GCGCGC | CfrMH15ORF24730P |
| 24740 | 211 aa hypothetical protein | |||
| 24930 | 79 aa hypothetical protein | |||
| 24935 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.CfrMH15IV |
| 24940 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | CfrMH15IV |
| 24945 | 190 aa hypothetical protein | |||
| 26015 | integrase | |||
| 26020 | M | M.Pge2520ORFAP (100% identity) | M.CfrMH15ORF26020P | |
| 26025 | DNA helicase | |||