Pectobacterium parmentieri IFB5486 |
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Putative Pectobacterium parmentieri IFB5486 RM systems
Ref: Zoledowska,S. unpublished
REBASE ref # 27593
Complete sequence: 5,038,122 bp
GenBank #: CP026982
REBASE acronym: Ppa5486
Org_num: 31430
All begin C5E22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20250 | hydroxyacid dehydrogenase | |||
| 20255 | R | Pwa1AORF16135P (100% identity) | Ppa5486ORF20265P | |
| 20260 | S | S.Pwa1AORF16135P (100% identity) | S.Ppa5486ORF20265P | |
| 20265 | M | M.Pwa1AORF16135P (100% identity) | M.Ppa5486ORF20265P | |
| 20270 | DUF4102 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18530 | type VI secretion system tube protein Hcp | |||
| 18535 | R | Pwa1AORF14510P (100% identity) | Ppa5486ORF18535P | |
| 18540 | XRE family transcriptional regulator | |||
| 20045 | DUF1615 domain-containing protein | |||
| 20050 | R | Pwa1AORF15930P (100% identity) | Ppa5486ORF20050P | |
| 20055 | 446 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19075 | 287 aa hypothetical protein | |||
| 19080 | M | M.SspCSC39ORF2310P (61% identity) | M.Ppa5486ORF19080P | |
| 19085 | R | Ykr60539ORF15650P (93% identity) | Ppa5486ORF19080P | |
| 19090 | 512 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1895 | SPOR domain-containing protein | |||
| 1900 | M | M.PwaDamP (100% identity) | M.Ppa5486ORF1900P | |
| 1905 | ribulose-phosphate 3-epimerase | |||
| 12060 | DUF1367 domain-containing protein | |||
| 12065 | M | M.Pwa1AORF7980P (100% identity) | M.Ppa5486ORF12065P | |
| 12070 | recombination-associated protein RdgC | |||