Pectobacterium parmentieri IFB5604 |
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Putative Pectobacterium parmentieri IFB5604 RM systems
Ref: Zoledowska,S. unpublished
REBASE ref # 27593
Complete sequence: 4,877,201 bp
GenBank #: CP026983
REBASE acronym: Ppa5604
Org_num: 31431
All begin C5E23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7940 | 428 aa hypothetical protein | |||
| 7945 | S | S.PpaQK5ORF8225P (100% identity) | S.Ppa5604ORF7950P | |
| 7950 | M | M.PpaQK5ORF8225P (100% identity) | M.Ppa5604ORF7950P | |
| 7955 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2610 | DUF4102 domain-containing protein | |||
| 2615 | R | PpaQK5DptFP (100% identity) | Ppa5604DptFP | |
| 2620 | DNA phosphorothioation-dependent restriction | |||
| 2615 | DNA phosphorothioation-dependent restriction | |||
| 2620 | R | PpaQK5DptGP (100% identity) | Ppa5604DptGP | |
| 2625 | DNA phosphorothioation-dependent restriction | |||
| 2620 | DNA phosphorothioation-dependent restriction | |||
| 2625 | R | PpaQK5DptHP (100% identity) | Ppa5604DptHP | |
| 2630 | 174 aa hypothetical protein | |||
| 2635 | DGQHR domain-containing protein | |||
| 2640 | M | M.PpaQK5DndEP (100% identity) | M.Ppa5604DndEP | |
| 2645 | DNA sulfur modification protein DndD | |||
| 2640 | DNA sulfur modification protein DndE | |||
| 2645 | M | M.PpaQK5DndDP (100% identity) | M.Ppa5604DndDP | |
| 2650 | DNA phosphorothioation system sulfurtransferase | |||
| 2645 | DNA sulfur modification protein DndD | |||
| 2650 | M | M.PpaQK5DndCP (100% identity) | M.Ppa5604DndCP | |
| 2655 | DNA sulfur modification protein DndB | |||
| 2650 | DNA phosphorothioation system sulfurtransferase | |||
| 2655 | M | M.PpaQK5DndBP (100% identity) | M.Ppa5604DndBP | |
| 2660 | transcriptional regulator | |||
| 16375 | 576 aa hypothetical protein | |||
| 16380 | M | M.PpaQK5ORF16970P (100% identity) | RCCGGY | M.Ppa5604ORF16380P |
| 16385 | histidine kinase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6965 | inovirus Gp2 family protein | |||
| 6970 | R | PpaQK5GmrSDP (100% identity) | Ppa5604GmrSDP | |
| 6975 | 178 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19710 | ribulose-phosphate 3-epimerase | |||
| 19715 | M | M.PwaDamP (100% identity) | M.Ppa5604ORF19715P | |
| 19720 | SPOR domain-containing protein | |||